Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0514
         (506 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   0.79 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    24   1.0  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   1.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    23   1.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    23   1.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.8  
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           22   4.2  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   5.6  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.3  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   7.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.7  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 349 AWSGPRPSPLTGARKTYG 296
           A    +PSP+TGA K++G
Sbjct: 357 AQKSQKPSPVTGASKSHG 374


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 70  NINITLKSNRTKSPTLVPIP 11
           N+N  LK++ ++SP L P P
Sbjct: 77  NLNFFLKNDESESPKLNPYP 96


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +1

Query: 286 IRSFRTSCVRRSAEKVEDHSRLWVIERVVSAALVPLIPLALMMP 417
           +RS + SC+ R A + +    L V+     A  +P   L L  P
Sbjct: 287 VRSHQQSCINRVARETKTAGTLAVVVGGFVACWLPFFILYLATP 330


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 359 MTQSLEWSSTFSADRRTQDVRNERIAFNMGVVLVSFIIFLT-GNELE 222
           M+ SL+WSST + D   +      I  ++    +S II +  G++LE
Sbjct: 490 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLE 536


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 359 MTQSLEWSSTFSADRRTQDVRNERIAFNMGVVLVSFIIFLT-GNELE 222
           M+ SL+WSST + D   +      I  ++    +S II +  G++LE
Sbjct: 528 MSSSLQWSSTHTLDVAWRRKVTIEILNSLSATKLSKIILMQFGDKLE 574


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 375 CCTGPIDSVSPHDAEQTIRLSPG 443
           CC    D + P+  +  IR+ PG
Sbjct: 446 CCFAQDDGLCPYTLKHKIRVPPG 468


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 12 GIGTRVGDFVLLDFKVIFIFYYYK 83
          G GT +G   L+D  VIF+   Y+
Sbjct: 7  GSGTPMGAKYLMDSDVIFVTINYR 30


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/46 (19%), Positives = 20/46 (43%)
 Frame = -1

Query: 311 TQDVRNERIAFNMGVVLVSFIIFLTGNELEIIRCVIAGWVASLIAC 174
           T+ +R     F + + + +F++    +   +I C    WV   + C
Sbjct: 80  TKSLRTPSNLFVINLAISNFLMMFCMSPPMVINCYYETWVLGPLFC 125


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 61  ITLKSNRTKSPTLVPIP 11
           I+L +NR  SP L P P
Sbjct: 97  ISLDTNRGGSPKLTPYP 113


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 269 VVLVSFIIFLTGNELEIIRCVI 204
           + L   +IF+TG    II C++
Sbjct: 36  ITLTYVVIFVTGFVGNIITCIV 57


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 9/46 (19%), Positives = 19/46 (41%)
 Frame = -1

Query: 311 TQDVRNERIAFNMGVVLVSFIIFLTGNELEIIRCVIAGWVASLIAC 174
           T+ +R     F + + +  F++    +   +I C    WV   + C
Sbjct: 46  TKSLRTPSNLFVINLAISDFLMMFCMSPPMVINCYYETWVLGPLFC 91


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -1

Query: 485 IASRPQKL*AVISIARRESNSLFGIMRANGINGTSAAETTL 363
           I + PQ +   +S     + +   + R   ++G S++ TTL
Sbjct: 697 IEAEPQPIGKALSKCHNRNVTTCNMFRKTNLSGDSSSGTTL 737


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 52  KSNRTKSPTLVPIP 11
           K ++TKSP L P P
Sbjct: 219 KHSKTKSPKLRPYP 232


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,118
Number of Sequences: 438
Number of extensions: 3256
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)