Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0512
(637 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 29 0.032
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 28 0.057
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 28 0.057
U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 24 0.92
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 24 0.92
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 23 2.1
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 3.7
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 3.7
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 3.7
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 3.7
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 3.7
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 6.5
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 29.1 bits (62), Expect = 0.032
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 384 PRFDEGRPVTFGTVDDEGRIVAYPDYSWHENQGQNCGGLTSVFRVAIDECN 536
P+ E P T + D RI A WHE + L SVFR+ D+C+
Sbjct: 283 PQITELEPETIESQDAITRIYAIATM-WHETPEEMMEFLKSVFRLDQDQCS 332
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 28.3 bits (60), Expect = 0.057
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 384 PRFDEGRPVTFGTVDDEGRIVAYPDYSWHENQGQNCGGLTSVFRVAIDECN 536
P+ E P T + D RI A WHE + L SVFR+ D+C+
Sbjct: 516 PQITELEPETIESQDAITRIYACGTM-WHETPEEMMEFLKSVFRLDQDQCS 565
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 28.3 bits (60), Expect = 0.057
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 384 PRFDEGRPVTFGTVDDEGRIVAYPDYSWHENQGQNCGGLTSVFRVAIDECN 536
P+ E P T + D RI A WHE + L SVFR+ D+C+
Sbjct: 516 PQITELEPETIESQDAITRIYACGTM-WHETPEEMMEFLKSVFRLDQDQCS 565
>U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein.
Length = 425
Score = 24.2 bits (50), Expect = 0.92
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 232 GNGRNWSSCFRTKKPGHMH*RNDF 303
GN ++W+ F+ K G+ R DF
Sbjct: 190 GNAKHWTGIFQKKWRGYEDFRRDF 213
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 24.2 bits (50), Expect = 0.92
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = -2
Query: 441 YVPRRLQFQMSQDVLRQNEVLSQISAIFYL 352
+VPRR+ F + ++ R+N + + +F +
Sbjct: 331 FVPRRVPFDLFENKKRKNNIKLYVRRVFIM 360
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 23.0 bits (47), Expect = 2.1
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1
Query: 442 IRPSSSTVPNVTGRPSSKRGIVTNIRDFLPDLC 344
+ P V VT +PSS + RD LC
Sbjct: 390 VEPVPQPVEEVTQKPSSTKAPAPPSRDLTTTLC 422
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 465 WHENQGQNCGGLTSVFRVAIDECNRLWIMDAGKIGDTQY 581
WHEN+ + L S+ R+ D+ R ++ D Y
Sbjct: 570 WHENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDY 608
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 465 WHENQGQNCGGLTSVFRVAIDECNRLWIMDAGKIGDTQY 581
WHEN+ + L S+ R+ D+ R ++ D Y
Sbjct: 570 WHENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDY 608
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 465 WHENQGQNCGGLTSVFRVAIDECNRLWIMDAGKIGDTQY 581
WHEN+ + L S+ R+ D+ R ++ D Y
Sbjct: 570 WHENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDY 608
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 22.2 bits (45), Expect = 3.7
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +3
Query: 465 WHENQGQNCGGLTSVFRVAIDECNRLWIMDAGKIGDTQY 581
WHEN+ + L S+ R+ D+ R ++ D Y
Sbjct: 570 WHENKEEMMEFLKSILRLDEDQSARRVAQKYLRVVDPDY 608
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 22.2 bits (45), Expect = 3.7
Identities = 10/46 (21%), Positives = 20/46 (43%)
Frame = -2
Query: 270 LRSETRTPVPPIASPRGDYSSLRDRANSTPNNMTIEKIARFRTTFP 133
++S+ P P I SP +S ++ PN+ + + + P
Sbjct: 412 MQSQIINPQPQITSPSNTNTSTSSTNSNKPNSSDLNMLIKETMPLP 457
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 6.5
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = +3
Query: 585 PPQVLAFDLATDRL 626
PPQ+L FD D +
Sbjct: 602 PPQILPFDFGEDSI 615
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,171
Number of Sequences: 336
Number of extensions: 3861
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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