Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0509
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    24   5.2  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   9.1  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   9.1  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -2

Query: 174  MKPSVVLHDLMLYQRNRRNNCESTQQLT 91
            + P  +L  ++  Q+N  N CE+ +Q+T
Sbjct: 991  VNPDTLLTHMLQSQQNWSNVCEAAKQIT 1018


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 153  HDLMLYQRNRRNNC 112
            H+LML +R +R NC
Sbjct: 1857 HELMLEERFKRKNC 1870


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = -1

Query: 352 SPRKNSANLFHTFIILFE*NVKGPNFEPISRR 257
           S    +A +FHT  + ++  ++ P+ EP  R+
Sbjct: 535 SSESTTAPIFHTHFLGYQPQMQLPHVEPFYRK 566


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 663,283
Number of Sequences: 2352
Number of extensions: 13425
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)