BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NRPG0509 (694 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z48585-3|CAA88485.1| 322|Caenorhabditis elegans Hypothetical pr... 29 3.2 AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical ... 28 5.5 Z50070-6|CAA90395.1| 548|Caenorhabditis elegans Hypothetical pr... 27 9.6 >Z48585-3|CAA88485.1| 322|Caenorhabditis elegans Hypothetical protein ZK673.3 protein. Length = 322 Score = 29.1 bits (62), Expect = 3.2 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = -3 Query: 551 LKAISIG--REKRNALGRARKHRITKILLHFTRIWYILFK*GNLLEN-FIYHLAKY 393 L A IG R+ +A+ + RK + HF I++++F+ G +EN + H AKY Sbjct: 94 LTATVIGYCRDPSDAVNQIRKESLRACTKHFNSIFHVIFE-GLQIENTYCAHHAKY 148 >AC006769-1|AAF60590.2| 287|Caenorhabditis elegans Hypothetical protein Y45G12C.8 protein. Length = 287 Score = 28.3 bits (60), Expect = 5.5 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = -1 Query: 472 YILHEFGTFCLNRVTY*KILFTI*LSIKNYFKIQTQTSKKSPRKNSANLFHTFIILF 302 ++LHE CLN V + IL LS +++ +TQT+KK L + FI+ F Sbjct: 172 WVLHEQTVGCLN-VVFSLILCIRILS--SHYSSKTQTNKKLSIATRIALLNAFIVFF 225 >Z50070-6|CAA90395.1| 548|Caenorhabditis elegans Hypothetical protein F43G6.6 protein. Length = 548 Score = 27.5 bits (58), Expect = 9.6 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = +2 Query: 134 WYSIRSCKTTDGFMCRAIKEWY**FSTKNYLNRCELK 244 W + C+T+ F+C ++E+ K Y ++CE K Sbjct: 36 WITCYHCQTSYHFLCSGLEEYEYYLIDKFYCSKCEPK 72 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,688,404 Number of Sequences: 27780 Number of extensions: 283829 Number of successful extensions: 518 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 508 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 518 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1592382278 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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