Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0508
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         25   1.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   1.9  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.6  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   4.5  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    23   5.9  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   5.9  
AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.        23   5.9  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   7.8  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   7.8  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   7.8  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   7.8  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    23   7.8  

>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 15/58 (25%), Positives = 27/58 (46%)
 Frame = -1

Query: 418 YCNSSLTFQLH*VHNSTNIVFTFNLVHLVYSSSIEQNTFSECCLSRVYVS*YTNISNI 245
           YC+    F L+   N+TN      LVHL + + + +   +   L  + V  + + SN+
Sbjct: 364 YCSGECNFPLNAHMNATNHAIVQTLVHLNHPTKVPKPCCAPTKLIPISVLYHIDESNV 421


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 553 CRWCSEPNF 579
           CRWC+ PNF
Sbjct: 51  CRWCTMPNF 59


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -1

Query: 538 YRPI*NS*-CSFYFYC-EIYMSWSINNVNVMFLPNSVCCSRLYCNSSLT 398
           + PI N+  C+F   C EI+ SW   N   + +    C S   C S +T
Sbjct: 780 FAPINNTGDCTFLQDCIEIFCSWCKRNGLTICIEKCYCVSFSRCRSPVT 828


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 290 TTLTERILFYTGRI 331
           TTLT+ IL YTG++
Sbjct: 135 TTLTKAILHYTGKV 148


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = +3

Query: 162 IQKNRVYFKLS-YRNIHHMSNMQNTNHWKIFEILVYQLT*TLERQHSLNVFCSIL 323
           I KN     L  Y NI+      N +    + +++ Q   TL RQ + N F S L
Sbjct: 396 IDKNPPTMNLDGYANINRGLITSNISFMATYLVVLMQFKLTLLRQSAKNAFISAL 450


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -3

Query: 287 FQSLCELIYQYFEYFPMVCVL 225
           ++S CE+  +YF +    CVL
Sbjct: 148 YKSSCEIDVEYFPFDEQTCVL 168


>AY578795-1|AAT07300.1|  441|Anopheles gambiae Gbb-60A2 protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = -1

Query: 418 YCNSSLTFQLH*VHNSTNIVFTFNLVHLVYSSSIEQNTFSECCLSRVYVS*YTNISNI 245
           +C     F L+   N+TN      LVHL++ + + +   +   L+ + V  + + +NI
Sbjct: 368 FCFGECNFPLNTHMNATNHALIQTLVHLMHPTRVPKPCCAPTKLNPISVLYHIDDANI 425


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 287 FQSLCELIYQYFEYFPMVCVL 225
           ++S CE+  +YF Y    C++
Sbjct: 150 YKSSCEMNVEYFPYDEQTCLM 170


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 287 FQSLCELIYQYFEYFPMVCVLHI 219
           ++S C +  +YF Y    CVL +
Sbjct: 148 YKSSCSIDVEYFPYDVQTCVLKL 170


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -1

Query: 514 CSFYFYCEIYMSWSINNVNVMFLP 443
           CS YF   +Y+ W  + + +   P
Sbjct: 74  CSIYFISNVYIKWQSSPIIIGLNP 97


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = -1

Query: 514 CSFYFYCEIYMSWSINNVNVMFLP 443
           CS YF   +Y+ W  + + +   P
Sbjct: 74  CSIYFISNVYIKWQSSPIIIGLNP 97


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +2

Query: 305 RILFYTGRIDQMHEVKG-KDNVGAVMDSMELERQRGITIQSAATYTIWKE 451
           R L++T    ++ EV   ++ + + +   +LE+ RGI +   + Y  W +
Sbjct: 132 RKLYWTDAGRKVLEVSDLEEGIRSALVWKDLEQPRGIALDYESGYLFWSD 181


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,665
Number of Sequences: 2352
Number of extensions: 13369
Number of successful extensions: 27
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)