Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0507
         (694 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            28   0.24 
AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding prot...    27   0.42 
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   1.7  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.0  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.0  
AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450 CY...    24   5.2  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   5.2  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    23   6.9  
AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.           23   9.1  
AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.     23   9.1  
AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    23   9.1  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    23   9.1  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   9.1  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 28.3 bits (60), Expect = 0.24
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +1

Query: 103  TAPTQEMEQPEGQKVQDGAPVQ-MSLPWGLTPADLHAIHRSAQHAIDQSRREQQMDNDMQ 279
            TA  Q+   P+G+     A  Q + LP   +      +HRS Q    Q +++QQ     Q
Sbjct: 1259 TAQHQDPRGPQGRSTDYHATQQPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQ 1318

Query: 280  E 282
            +
Sbjct: 1319 Q 1319


>AY578802-1|AAT07307.1|  108|Anopheles gambiae FK506-binding protein
           protein.
          Length = 108

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = +2

Query: 467 IRCWRAGNA*SAVLANVPRVCSRLYNIGSRSHSG--PPS 577
           IR W  G A  +V      VCS  Y  GSR H G  PP+
Sbjct: 57  IRGWDEGVAQMSVGQRAKLVCSPDYAYGSRGHPGVIPPN 95


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = -1

Query: 535 SRADSRHICKHSASRVSRPPASNRRCELSEAAYNVASRQSRVVP 404
           + A  R  C+   +   RP A    C     +Y+VA    R++P
Sbjct: 799 AEATDRQWCQRMLASFQRPLAQRVVCGFRSISYSVAVLMPRLIP 842


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 247 VTGRLHAERSGVSHAGRPGSSPTGDSSAPGHRP 149
           V GRL A+ S   ++  P  +P  + + PG  P
Sbjct: 360 VIGRLPADNSSALNSPNPARAPPRNFTMPGPGP 392


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 12/31 (38%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
 Frame = -1

Query: 223 RSGVSHAGRPGSS-PTGDSSAPGHRPAPSGP 134
           R    H G  G+S P G   APG    P  P
Sbjct: 56  RGLTGHRGEKGNSGPVGPPGAPGRDGMPGAP 86


>AY193730-1|AAO62003.1|  441|Anopheles gambiae cytochrome P450
           CYPm3r10 protein.
          Length = 441

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 202 LHAIHRSAQHAIDQSRREQQMDNDMQEVK 288
           +HAIHR  +H  D  R +       QE K
Sbjct: 340 VHAIHRDPEHFPDPERFDPDRFTAEQEAK 368


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 11/34 (32%), Positives = 12/34 (35%)
 Frame = -3

Query: 230 C*AERCIACRSAGVKPHGRLICTGAPSCTFWPSG 129
           C  +R   C   G K H    C   P C   P G
Sbjct: 445 CGPDRRDCCLRGGEKGHFAATCRLPPRCVLCPDG 478


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 12/40 (30%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
 Frame = -3

Query: 260 CCSRRDWSIAC*A--ERCIACRSAGVKPHGRLICTGAPSC 147
           C     W+  C +  +R   C   GV  H   +CT  P C
Sbjct: 665 CLELGHWAHDCRSPDDRQNMCIRCGVVGHMAKVCTSQPKC 704



 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/62 (20%), Positives = 23/62 (37%)
 Frame = +1

Query: 97  PQTAPTQEMEQPEGQKVQDGAPVQMSLPWGLTPADLHAIHRSAQHAIDQSRREQQMDNDM 276
           PQ    ++ +Q   Q+ Q     Q        P  L    +  QH   Q +++QQ     
Sbjct: 267 PQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQ 326

Query: 277 QE 282
           ++
Sbjct: 327 RQ 328


>AY873992-1|AAW71999.1|  259|Anopheles gambiae nanos protein.
          Length = 259

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 215 CIACRSAGVKPHGRLICTGAPSCTFWPSGC 126
           C+ C++ G K H    C   P  T  P  C
Sbjct: 191 CMRCKATGTKAHTAKYCPLKPVIT--PEDC 218


>AY583530-1|AAS93544.1|  260|Anopheles gambiae NOS protein protein.
          Length = 260

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -3

Query: 215 CIACRSAGVKPHGRLICTGAPSCTFWPSGC 126
           C+ C++ G K H    C   P  T  P  C
Sbjct: 192 CMRCKATGTKAHTAKYCPLKPVIT--PEDC 219


>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 492 AFPALQHRIDAAN*ARLHIMWPLVK 418
           AF  + HR+  A  AR+ +  PLVK
Sbjct: 73  AFDRVNHRLLLAKLARIGLSTPLVK 97


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 121 MEQPEGQKVQDGAPVQMSLPWGLTPADLHAIHRSAQHAIDQSRREQQMD 267
           +E P G ++   A   + L  G TPA    +   A  A+D+  RE  ++
Sbjct: 661 VELPPGAELIGYADDLVLLAPGTTPAAAAVVAEEAVSAVDRWLREHHLE 709


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
 Frame = +2

Query: 419 LTRGHIICSLAQFAASIRCWRAGNA*SAVLANVPRV----CSRLYNIGSRSHSGPPS 577
           L RGHI  +      S RC R G+           V    C   + IG+ +  G PS
Sbjct: 470 LERGHIAATCTGEDRSKRCLRCGDQTHKASGCTNEVKCMLCGGAHRIGAAACGGQPS 526


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,877
Number of Sequences: 2352
Number of extensions: 14041
Number of successful extensions: 53
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70250040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)