Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0505
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin cross... 31 2.6
AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin cross... 31 2.6
AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin cross... 31 2.6
AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin cross... 31 2.6
AK127519-1|BAC87016.1| 1062|Homo sapiens protein ( Homo sapiens ... 31 2.6
AF325341-1|AAL39000.1| 4631|Homo sapiens macrophin 1 isoform 2 p... 31 2.6
AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein. 31 2.6
AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein A... 31 2.6
BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein. 31 4.5
BC008827-1|AAH08827.1| 977|Homo sapiens zinc finger and SCAN do... 31 4.5
AL138837-3|CAI19594.1| 977|Homo sapiens zinc finger and SCAN do... 31 4.5
AL138837-2|CAM12881.1| 1043|Homo sapiens zinc finger and SCAN do... 31 4.5
AK131405-1|BAD18552.1| 1043|Homo sapiens protein ( Homo sapiens ... 31 4.5
AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 31 4.5
AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K exc... 31 4.5
AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+... 31 4.5
AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein. 31 4.5
BC009472-1|AAH09472.1| 544|Homo sapiens debranching enzyme homo... 30 7.9
AK000116-1|BAA90954.1| 312|Homo sapiens protein ( Homo sapiens ... 30 7.9
AF180919-1|AAD53327.2| 544|Homo sapiens RNA lariat debranching ... 30 7.9
AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to... 30 7.9
>AL442071-1|CAH73668.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 495 RKSHLTRRNLRPPTSAILAPLQNSTPLTRLTHSSS 599
RK H T L PP++ L+ + PLT+ THSSS
Sbjct: 528 RKGHFTSLELVPPSTLTTTHLK-AEPLTKATHSSS 561
>AL365277-7|CAI16417.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 495 RKSHLTRRNLRPPTSAILAPLQNSTPLTRLTHSSS 599
RK H T L PP++ L+ + PLT+ THSSS
Sbjct: 528 RKGHFTSLELVPPSTLTTTHLK-AEPLTKATHSSS 561
>AL355477-1|CAH70156.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 495 RKSHLTRRNLRPPTSAILAPLQNSTPLTRLTHSSS 599
RK H T L PP++ L+ + PLT+ THSSS
Sbjct: 528 RKGHFTSLELVPPSTLTTTHLK-AEPLTKATHSSS 561
>AL137853-1|CAI21814.1| 5430|Homo sapiens microtubule-actin
crosslinking factor 1 protein.
Length = 5430
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 495 RKSHLTRRNLRPPTSAILAPLQNSTPLTRLTHSSS 599
RK H T L PP++ L+ + PLT+ THSSS
Sbjct: 528 RKGHFTSLELVPPSTLTTTHLK-AEPLTKATHSSS 561
>AK127519-1|BAC87016.1| 1062|Homo sapiens protein ( Homo sapiens
cDNA FLJ45612 fis, clone BRTHA3025073, highly similar
to Actin cross-linking family protein 7. ).
Length = 1062
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 495 RKSHLTRRNLRPPTSAILAPLQNSTPLTRLTHSSS 599
RK H T L PP++ L+ + PLT+ THSSS
Sbjct: 688 RKGHFTSLELVPPSTLTTTHLK-AEPLTKATHSSS 721
>AF325341-1|AAL39000.1| 4631|Homo sapiens macrophin 1 isoform 2
protein.
Length = 4631
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 495 RKSHLTRRNLRPPTSAILAPLQNSTPLTRLTHSSS 599
RK H T L PP++ L+ + PLT+ THSSS
Sbjct: 347 RKGHFTSLELVPPSTLTTTHLK-AEPLTKATHSSS 380
>AF141968-1|AAF06360.1| 5373|Homo sapiens trabeculin-alpha protein.
Length = 5373
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 495 RKSHLTRRNLRPPTSAILAPLQNSTPLTRLTHSSS 599
RK H T L PP++ L+ + PLT+ THSSS
Sbjct: 493 RKGHFTSLELVPPSTLTTTHLK-AEPLTKATHSSS 526
>AB029290-1|BAA83821.1| 5430|Homo sapiens actin binding protein
ABP620 protein.
Length = 5430
Score = 31.5 bits (68), Expect = 2.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3
Query: 495 RKSHLTRRNLRPPTSAILAPLQNSTPLTRLTHSSS 599
RK H T L PP++ L+ + PLT+ THSSS
Sbjct: 528 RKGHFTSLELVPPSTLTTTHLK-AEPLTKATHSSS 561
>BC117263-1|AAI17264.1| 1069|Homo sapiens SLC24A1 protein protein.
Length = 1069
Score = 30.7 bits (66), Expect = 4.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 353 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 451
D GD + EE++ +E + E +E+QE + +E
Sbjct: 855 DGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEE 887
>BC008827-1|AAH08827.1| 977|Homo sapiens zinc finger and SCAN
domain containing 20 protein.
Length = 977
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 311 AFMKAFYKDVAIPLDSG-DCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 457
A K + V PLD G D + E +D +W N S ++ QE++S+ E +
Sbjct: 582 ALSKCPTEAVCQPLDWGEDSENENEDEGQWGNPSQEQWQESSSEEDLEKL 631
>AL138837-3|CAI19594.1| 977|Homo sapiens zinc finger and SCAN
domain containing 20 protein.
Length = 977
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 311 AFMKAFYKDVAIPLDSG-DCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 457
A K + V PLD G D + E +D +W N S ++ QE++S+ E +
Sbjct: 582 ALSKCPTEAVCQPLDWGEDSENENEDEGQWGNPSQEQWQESSSEEDLEKL 631
>AL138837-2|CAM12881.1| 1043|Homo sapiens zinc finger and SCAN
domain containing 20 protein.
Length = 1043
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 311 AFMKAFYKDVAIPLDSG-DCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 457
A K + V PLD G D + E +D +W N S ++ QE++S+ E +
Sbjct: 648 ALSKCPTEAVCQPLDWGEDSENENEDEGQWGNPSQEQWQESSSEEDLEKL 697
>AK131405-1|BAD18552.1| 1043|Homo sapiens protein ( Homo sapiens
cDNA FLJ16509 fis, clone HCHON2004858, moderately
similar to Zinc finger protein 29. ).
Length = 1043
Score = 30.7 bits (66), Expect = 4.5
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 311 AFMKAFYKDVAIPLDSG-DCDYEEKDYDEWDNESGQEQQENNSDSSDEPI 457
A K + V PLD G D + E +D +W N S ++ QE++S+ E +
Sbjct: 648 ALSKCPTEAVCQPLDWGEDSENENEDEGQWGNPSQEQWQESSSEEDLEKL 697
>AF062922-1|AAC77912.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger protein.
Length = 1099
Score = 30.7 bits (66), Expect = 4.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 353 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 451
D GD + EE++ +E + E +E+QE + +E
Sbjct: 855 DGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEE 887
>AF062921-1|AAC16732.1| 1099|Homo sapiens retinal rod Na-Ca+K
exchanger splice variant protein.
Length = 1099
Score = 30.7 bits (66), Expect = 4.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 353 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 451
D GD + EE++ +E + E +E+QE + +E
Sbjct: 855 DGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEE 887
>AF026132-1|AAB97832.1| 1081|Homo sapiens retinal rod Na+/Ca+, K+
exchanger protein.
Length = 1081
Score = 30.7 bits (66), Expect = 4.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 353 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 451
D GD + EE++ +E + E +E+QE + +E
Sbjct: 837 DGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEE 869
>AB014602-1|BAA31677.2| 988|Homo sapiens KIAA0702 protein protein.
Length = 988
Score = 30.7 bits (66), Expect = 4.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 353 DSGDCDYEEKDYDEWDNESGQEQQENNSDSSDE 451
D GD + EE++ +E + E +E+QE + +E
Sbjct: 840 DGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEE 872
>BC009472-1|AAH09472.1| 544|Homo sapiens debranching enzyme homolog
1 (S. cerevisiae) protein.
Length = 544
Score = 29.9 bits (64), Expect = 7.9
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 368 DYEEKDYDEWDNESGQEQQENNSDSS 445
+YEE+D D N+SG++Q E N+D+S
Sbjct: 395 EYEEQD-DVESNDSGEDQSEYNTDTS 419
>AK000116-1|BAA90954.1| 312|Homo sapiens protein ( Homo sapiens
cDNA FLJ20109 fis, clone COL05067. ).
Length = 312
Score = 29.9 bits (64), Expect = 7.9
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 368 DYEEKDYDEWDNESGQEQQENNSDSS 445
+YEE+D D N+SG++Q E N+D+S
Sbjct: 163 EYEEQD-DVESNDSGEDQSEYNTDTS 187
>AF180919-1|AAD53327.2| 544|Homo sapiens RNA lariat debranching
enzyme protein.
Length = 544
Score = 29.9 bits (64), Expect = 7.9
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +2
Query: 368 DYEEKDYDEWDNESGQEQQENNSDSS 445
+YEE+D D N+SG++Q E N+D+S
Sbjct: 395 EYEEQD-DVESNDSGEDQSEYNTDTS 419
>AB032255-1|BAA89212.1| 1972|Homo sapiens bromodomain adjacent to zinc
finger domain 2B protein.
Length = 1972
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 359 GDCDYEEKDYDEWDNESGQEQQENNSDSSDE 451
GD DY++ D D+ D++ G E E+ D D+
Sbjct: 1099 GDSDYDDDDDDDSDDQ-GDEDDEDEEDKEDQ 1128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,072,367
Number of Sequences: 237096
Number of extensions: 1457356
Number of successful extensions: 7904
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 7711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7902
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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