Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0501
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    25   0.51 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    24   1.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.7  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.2  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   8.2  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -3

Query: 295 YVTGYTMLMYDTIFVP*INGSYLRPLKKTT 206
           YV+GY   + D   +P +   YLRPL   T
Sbjct: 16  YVSGYLENIRDRRVLPTVEPGYLRPLIPAT 45


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -1

Query: 555 EGCTVFTKQSVTKNGKGMFKWLSN 484
           EGC  F ++S+TKN     K+ +N
Sbjct: 206 EGCKGFFRRSITKNAVYQCKYGNN 229


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 4/12 (33%), Positives = 10/12 (83%)
 Frame = -2

Query: 290 YWLYHAYVRYYL 255
           YWL+H ++ +++
Sbjct: 599 YWLFHCHIEFHV 610


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 84 TQCIYYYINLNLNQTQKSSTLPSCRFLQ 1
          +QC  ++  ++ +Q +  + L S  FLQ
Sbjct: 1  SQCKLHFDEMSYSQFENQAVLQSYNFLQ 28


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 214 KTTIRKTAYNTQSYVISSLRCIQSLAVTYI 125
           KTT+   A N    VI  L+ + + A TY+
Sbjct: 85  KTTVAWYAGNVACKVIRFLQVVVTYASTYV 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,652
Number of Sequences: 336
Number of extensions: 3193
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)