Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0501
         (615 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069171-1|AAL39316.1|  544|Drosophila melanogaster GH21176p pro...    29   3.8  
AY058776-1|AAL14005.1|  544|Drosophila melanogaster SD05904p pro...    29   3.8  
AE013599-2547|AAM68486.1|  544|Drosophila melanogaster CG6406-PB...    29   3.8  
AE013599-2546|AAF57803.1|  544|Drosophila melanogaster CG6406-PA...    29   3.8  
BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p pro...    29   5.0  
AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-P...    29   5.0  
DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265 prot...    28   8.7  
BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p pro...    28   8.7  
AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-P...    28   8.7  

>AY069171-1|AAL39316.1|  544|Drosophila melanogaster GH21176p
           protein.
          Length = 544

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 162 HCDAFSHWQLHT*IYNLQVLLQVKFNTQCIYYYINLNLNQTQKSSTLPSCR 10
           +C+    W  H  I ++    +++  T  ++ Y N  ++QTQKSS L  CR
Sbjct: 153 NCNREVKWGPHQRIESIHAQNRMRILTALLFCY-NQQVSQTQKSSLLHLCR 202


>AY058776-1|AAL14005.1|  544|Drosophila melanogaster SD05904p
           protein.
          Length = 544

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 162 HCDAFSHWQLHT*IYNLQVLLQVKFNTQCIYYYINLNLNQTQKSSTLPSCR 10
           +C+    W  H  I ++    +++  T  ++ Y N  ++QTQKSS L  CR
Sbjct: 153 NCNREVKWGPHQRIESIHAQNRMRILTALLFCY-NQQVSQTQKSSLLHLCR 202


>AE013599-2547|AAM68486.1|  544|Drosophila melanogaster CG6406-PB,
           isoform B protein.
          Length = 544

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 162 HCDAFSHWQLHT*IYNLQVLLQVKFNTQCIYYYINLNLNQTQKSSTLPSCR 10
           +C+    W  H  I ++    +++  T  ++ Y N  ++QTQKSS L  CR
Sbjct: 153 NCNREVKWGPHQRIESIHAQNRMRILTALLFCY-NQQVSQTQKSSLLHLCR 202


>AE013599-2546|AAF57803.1|  544|Drosophila melanogaster CG6406-PA,
           isoform A protein.
          Length = 544

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -1

Query: 162 HCDAFSHWQLHT*IYNLQVLLQVKFNTQCIYYYINLNLNQTQKSSTLPSCR 10
           +C+    W  H  I ++    +++  T  ++ Y N  ++QTQKSS L  CR
Sbjct: 153 NCNREVKWGPHQRIESIHAQNRMRILTALLFCY-NQQVSQTQKSSLLHLCR 202


>BT010048-1|AAQ22517.1| 1654|Drosophila melanogaster LD26355p
           protein.
          Length = 1654

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 197 NSIQHSILCDQFTAMHSVTGSYIHKFTICRYF 102
           N+I+H+I  D++ A+  V   Y   F+ CR +
Sbjct: 560 NTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQY 591


>AE014297-3630|AAF56339.1| 1654|Drosophila melanogaster CG11375-PA
           protein.
          Length = 1654

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -2

Query: 197 NSIQHSILCDQFTAMHSVTGSYIHKFTICRYF 102
           N+I+H+I  D++ A+  V   Y   F+ CR +
Sbjct: 560 NTIEHNIRTDRYAAVEDVVSDYRLMFSNCRQY 591


>DQ138896-1|ABA86502.1| 1309|Drosophila melanogaster CG18265
           protein.
          Length = 1309

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 591 NPSFFCEICNFKEGCTVFTKQSVTKNGKGMF 499
           NP  +CE+CN KE C  +  ++   N  G+F
Sbjct: 366 NPEAYCELCN-KEFCNKYFLKTHKANKHGIF 395


>BT011387-1|AAR96179.1| 1322|Drosophila melanogaster GH10077p
           protein.
          Length = 1322

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 591 NPSFFCEICNFKEGCTVFTKQSVTKNGKGMF 499
           NP  +CE+CN KE C  +  ++   N  G+F
Sbjct: 373 NPEAYCELCN-KEFCNKYFLKTHKANKHGIF 402


>AE014296-2912|AAF49339.1| 1322|Drosophila melanogaster CG18265-PA
           protein.
          Length = 1322

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -1

Query: 591 NPSFFCEICNFKEGCTVFTKQSVTKNGKGMF 499
           NP  +CE+CN KE C  +  ++   N  G+F
Sbjct: 373 NPEAYCELCN-KEFCNKYFLKTHKANKHGIF 402


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,882,763
Number of Sequences: 53049
Number of extensions: 479353
Number of successful extensions: 840
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)