Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0500
(477 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical pro... 25 0.36
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 24 0.83
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 1.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 1.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 1.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 1.1
AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine recombi... 23 1.9
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 3.3
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 22 3.3
DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11 pro... 21 4.4
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 7.7
EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4 prot... 21 7.7
>AM712904-1|CAN84643.1| 86|Tribolium castaneum hypothetical
protein protein.
Length = 86
Score = 25.0 bits (52), Expect = 0.36
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 11 LNTNKQIFPLYNIIIVSIRIWPKIDIRNIRML 106
L + Q+F L II++ + WPKI + + L
Sbjct: 1 LQVDMQLFVLSPIILIPLFRWPKIGLSALGFL 32
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 23.8 bits (49), Expect = 0.83
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 256 KTLLRYLIRYFQCSLECAVLCPHQITGQTTIV*ESRILNIH 378
KT + CSL VLC I G T+I+ L IH
Sbjct: 404 KTFCTLVTALVYCSLAIFVLCELLIEGTTSILINVPSLIIH 444
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 475 YVNKDEAISPQCYCVPKIKPQLEKPTYYIYLY 380
Y+++ I P + KIK LE+ Y+IY++
Sbjct: 271 YISRHSPI-PFIKKLGKIKENLEQSRYFIYMF 301
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 475 YVNKDEAISPQCYCVPKIKPQLEKPTYYIYLY 380
Y+++ I P + KIK LE+ Y+IY++
Sbjct: 271 YISRHSPI-PFIKKLGKIKENLEQSRYFIYMF 301
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 475 YVNKDEAISPQCYCVPKIKPQLEKPTYYIYLY 380
Y+++ I P + KIK LE+ Y+IY++
Sbjct: 271 YISRHSPI-PFIKKLGKIKENLEQSRYFIYMF 301
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.4 bits (48), Expect = 1.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 475 YVNKDEAISPQCYCVPKIKPQLEKPTYYIYLY 380
Y+++ I P + KIK LE+ Y+IY++
Sbjct: 271 YISRHSPI-PFIKKLGKIKENLEQSRYFIYMF 301
>AY531876-2|AAT08871.1| 340|Tribolium castaneum tyrosine
recombinase protein.
Length = 340
Score = 22.6 bits (46), Expect = 1.9
Identities = 8/18 (44%), Positives = 14/18 (77%)
Frame = -3
Query: 340 SVQLSDEGIELRIPNYIE 287
++ S EG+E+RIP+ I+
Sbjct: 187 NILFSAEGVEIRIPDVIK 204
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 21.8 bits (44), Expect = 3.3
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 335 DRPLSFENLES 367
D PLSF+N+ES
Sbjct: 37 DTPLSFKNIES 47
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.8 bits (44), Expect = 3.3
Identities = 7/22 (31%), Positives = 12/22 (54%)
Frame = -1
Query: 111 KCSMRMFLMSIFGQILIDTIII 46
KC +F + G + IDT ++
Sbjct: 377 KCLEHLFFFKLIGDVPIDTFLM 398
>DQ659251-1|ABG47449.1| 366|Tribolium castaneum chitinase 11
protein.
Length = 366
Score = 21.4 bits (43), Expect = 4.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 158 GVKWVLEPIDIYDVNAPST 214
G W L+ +DV AP+T
Sbjct: 250 GHSWYLQSTSNHDVGAPAT 268
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 20.6 bits (41), Expect = 7.7
Identities = 7/18 (38%), Positives = 10/18 (55%)
Frame = -3
Query: 79 FWPNSYRYYNNIVKRKDL 26
+WPN YR ++ DL
Sbjct: 157 YWPNMYRTIKKRLRSCDL 174
>EF125543-1|ABL73927.1| 475|Tribolium castaneum chitinase 4
protein.
Length = 475
Score = 20.6 bits (41), Expect = 7.7
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = -3
Query: 238 ETLELISQGGWRI 200
E +EL +GGW++
Sbjct: 301 EIVELQKEGGWKV 313
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,192
Number of Sequences: 336
Number of extensions: 2657
Number of successful extensions: 13
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -