Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0497
(658 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical pr... 33 0.24
AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical... 33 0.24
Z35595-9|CAA84638.1| 367|Caenorhabditis elegans Hypothetical pr... 30 1.7
Z69884-4|CAA93751.2| 913|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 28 6.7
U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated p... 28 6.7
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 28 6.7
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 28 6.7
AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein. 28 6.7
Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z93376-2|CAD59146.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 32.7 bits (71), Expect = 0.24
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Frame = -1
Query: 349 LCFNTSKVSGSYSSTXKGYFLD-LKSAELP--------RLDMPLM*TSTTASGVLNG--- 206
L N +KV+GS S KG D L + ELP + M L +G+LN
Sbjct: 26 LSLNGAKVTGSSLSEAKGLIADMLMNKELPGNVASCLRAVTMLLEQRPLPLNGLLNDFGL 85
Query: 205 -SVINNPFHSEFS--STERPREAENISFKRLSK------VLLEPEKLNDSGLWRMLSSP 56
SV+ NP+ E +PR NI+F ++ V EP K S W+ +SP
Sbjct: 86 PSVVENPYGGESMVVGASKPR-ISNITFSTVTSATGLPTVPAEPNKARSSSYWKTEASP 143
>Z82279-4|CAD59150.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 32.7 bits (71), Expect = 0.24
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Frame = -1
Query: 349 LCFNTSKVSGSYSSTXKGYFLD-LKSAELP--------RLDMPLM*TSTTASGVLNG--- 206
L N +KV+GS S KG D L + ELP + M L +G+LN
Sbjct: 26 LSLNGAKVTGSSLSEAKGLIADMLMNKELPGNVASCLRAVTMLLEQRPLPLNGLLNDFGL 85
Query: 205 -SVINNPFHSEFS--STERPREAENISFKRLSK------VLLEPEKLNDSGLWRMLSSP 56
SV+ NP+ E +PR NI+F ++ V EP K S W+ +SP
Sbjct: 86 PSVVENPYGGESMVVGASKPR-ISNITFSTVTSATGLPTVPAEPNKARSSSYWKTEASP 143
>AL132949-42|CAD59173.2| 578|Caenorhabditis elegans Hypothetical
protein E01F3.1b protein.
Length = 578
Score = 32.7 bits (71), Expect = 0.24
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 21/119 (17%)
Frame = -1
Query: 349 LCFNTSKVSGSYSSTXKGYFLD-LKSAELP--------RLDMPLM*TSTTASGVLNG--- 206
L N +KV+GS S KG D L + ELP + M L +G+LN
Sbjct: 26 LSLNGAKVTGSSLSEAKGLIADMLMNKELPGNVASCLRAVTMLLEQRPLPLNGLLNDFGL 85
Query: 205 -SVINNPFHSEFS--STERPREAENISFKRLSK------VLLEPEKLNDSGLWRMLSSP 56
SV+ NP+ E +PR NI+F ++ V EP K S W+ +SP
Sbjct: 86 PSVVENPYGGESMVVGASKPR-ISNITFSTVTSATGLPTVPAEPNKARSSSYWKTEASP 143
>Z35595-9|CAA84638.1| 367|Caenorhabditis elegans Hypothetical
protein C01G6.9 protein.
Length = 367
Score = 29.9 bits (64), Expect = 1.7
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 463 LKNSPWQHLKSSVEEDFQFLSE 528
L +S WQ+ KSS+EEDF +++
Sbjct: 237 LSSSTWQNCKSSLEEDFYLMNQ 258
>Z69884-4|CAA93751.2| 913|Caenorhabditis elegans Hypothetical
protein F31F6.5 protein.
Length = 913
Score = 29.1 bits (62), Expect = 2.9
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -2
Query: 474 TVF*LLEYLNHLTHLNMTKADQSHL 400
TVF LLEYLN+L+ LN D L
Sbjct: 639 TVFFLLEYLNYLSELNAEVEDTERL 663
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 2 YGICMGFLNLFNNRYQCIWRTKH 70
YG CMG N F+++ QC+ + K+
Sbjct: 66 YGGCMGTKNRFSSKQQCVKQCKY 88
>U64852-1|AAB04966.2| 1041|Caenorhabditis elegans Uncoordinated
protein 83, isoform a protein.
Length = 1041
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 493 SSVEEDFQFLSELAALKAVTEKVESGAISADNIIDFYNLRINSLHAL 633
S VE SE LK + E I +N YNL ++SLH L
Sbjct: 8 SEVEMPNDISSEDHLLKVIESSAEEVDIFLENCSSLYNLILDSLHNL 54
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 2 YGICMGFLNLFNNRYQCIWRTKH 70
YG CMG N F+++ QC+ + K+
Sbjct: 66 YGGCMGTKNRFSSKQQCVKQCKY 88
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 2 YGICMGFLNLFNNRYQCIWRTKH 70
YG CMG N F+++ QC+ + K+
Sbjct: 66 YGGCMGTKNRFSSKQQCVKQCKY 88
>AF338767-1|AAL15621.1| 1041|Caenorhabditis elegans UNC-83 protein.
Length = 1041
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 493 SSVEEDFQFLSELAALKAVTEKVESGAISADNIIDFYNLRINSLHAL 633
S VE SE LK + E I +N YNL ++SLH L
Sbjct: 8 SEVEMPNDISSEDHLLKVIESSAEEVDIFLENCSSLYNLILDSLHNL 54
>Z69661-6|CAA93492.4| 299|Caenorhabditis elegans Hypothetical
protein F48F7.2 protein.
Length = 299
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = -2
Query: 237 LRQLLQEC*TDQLSIIHSIRSSLQRKGQEKQKIFLLKDSRKFYWNQRNLTTQDY 76
LR+L+++ D L ++S +++ ++ Q + LLKD+ N N T QDY
Sbjct: 89 LRKLVRQAEDDFLEFTKQVQSVTEKRMRQNQ-LELLKDNLNKLINLFNETHQDY 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,886,055
Number of Sequences: 27780
Number of extensions: 269924
Number of successful extensions: 853
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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