Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0495
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      26   0.23 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      26   0.23 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.7  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   3.7  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   3.7  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
 Frame = +3

Query: 174 CGPLSPPSTPPLME-NKVELPLKKIAAKRARESSSPPAGLVTPQPSDSEGEDEFSKRS 344
           CG +    TPP  +   +   +    A     S + P G+V P PS S      S  S
Sbjct: 660 CGSMGDAHTPPEDDAESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVAS 717


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 26.2 bits (55), Expect = 0.23
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
 Frame = +3

Query: 174 CGPLSPPSTPPLME-NKVELPLKKIAAKRARESSSPPAGLVTPQPSDSEGEDEFSKRS 344
           CG +    TPP  +   +   +    A     S + P G+V P PS S      S  S
Sbjct: 552 CGSMGDAHTPPEDDAESLNQSISSPGALSGLSSLTSPGGMVLPSPSTSVASPSVSVAS 609


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
 Frame = -3

Query: 331  NSSSPSESEGWGVTRPAGGD---DDSLARFAAIF--LRGSSTLFSINGGVDGGERG 179
            NS+SP+ S+  G  R   GD     SL   +++F  L G++T  ++     GG++G
Sbjct: 933  NSASPASSDRSGTPRSTNGDRKPGGSLGALSSMFDSLSGNNTGDAL--APSGGKKG 986


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +3

Query: 180 PLSPPSTPPLMENKVE 227
           PL+PP++ PL+  K E
Sbjct: 105 PLTPPNSEPLVSPKSE 120


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +3

Query: 429 DGTCSPEPLPPPP 467
           DGT SPEP P  P
Sbjct: 75  DGTTSPEPDPEIP 87


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
 Frame = -1

Query: 171 LRAEWTFWLEWEHSTDK---NFLFNSQNLCY 88
           +   +TF LEW H+  K   +  +N+Q+ CY
Sbjct: 55  MTCRYTFLLEWYHTLSKACYDCPYNTQD-CY 84


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,534
Number of Sequences: 336
Number of extensions: 2612
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)