Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0495
(636 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ749862-1|CAG44484.1| 428|Drosophila melanogaster Cabut protein. 42 5e-04
AE014134-114|AAF51489.2| 428|Drosophila melanogaster CG4427-PA,... 42 5e-04
AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire pro... 30 3.0
AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-P... 30 3.0
AY051986-1|AAK93410.1| 613|Drosophila melanogaster LD45447p pro... 29 4.0
AE014297-4270|AAF56817.1| 621|Drosophila melanogaster CG1523-PA... 29 4.0
X76208-1|CAA53800.1| 518|Drosophila melanogaster protein 33-spe... 29 7.0
K02621-1|AAA28968.1| 531|Drosophila melanogaster protein ( D.me... 29 7.0
AY118801-1|AAM50661.1| 761|Drosophila melanogaster GH19726p pro... 29 7.0
AE014298-1785|AAF48177.1| 761|Drosophila melanogaster CG1824-PA... 29 7.0
AE014297-1995|AAS65155.1| 518|Drosophila melanogaster CG4898-PK... 29 7.0
AE014134-625|AAF51094.1| 676|Drosophila melanogaster CG3213-PA ... 28 9.2
>AJ749862-1|CAG44484.1| 428|Drosophila melanogaster Cabut protein.
Length = 428
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 10/56 (17%)
Frame = +3
Query: 186 SPPSTPPLMENKVELPLK----------KIAAKRARESSSPPAGLVTPQPSDSEGE 323
SPP+TPPL ENK+E+ K K K + S G++TP PSD+E E
Sbjct: 9 SPPATPPLRENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNGGIITPNPSDTEDE 64
>AE014134-114|AAF51489.2| 428|Drosophila melanogaster CG4427-PA,
isoform A protein.
Length = 428
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/56 (41%), Positives = 30/56 (53%), Gaps = 10/56 (17%)
Frame = +3
Query: 186 SPPSTPPLMENKVELPLK----------KIAAKRARESSSPPAGLVTPQPSDSEGE 323
SPP+TPPL ENK+E+ K K K + S G++TP PSD+E E
Sbjct: 9 SPPATPPLRENKLEIVAKDEQQVNENLLKAKLKLVAQKSQKNGGIITPNPSDTEDE 64
>AF262977-1|AAF76150.1| 5233|Drosophila melanogaster highwire protein.
Length = 5233
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 417 RAHKDGTCSPEPLPPPPAHGMNM 485
R K GT SPEP+P PP M
Sbjct: 1309 RGGKQGTSSPEPIPSPPQLAFTM 1331
>AE014298-2087|AAF48411.3| 5233|Drosophila melanogaster CG32592-PA
protein.
Length = 5233
Score = 29.9 bits (64), Expect = 3.0
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 417 RAHKDGTCSPEPLPPPPAHGMNM 485
R K GT SPEP+P PP M
Sbjct: 1309 RGGKQGTSSPEPIPSPPQLAFTM 1331
>AY051986-1|AAK93410.1| 613|Drosophila melanogaster LD45447p
protein.
Length = 613
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 228 LPLKKIAAKRARESSSPPAGLVTPQPSDSEGEDEFSKRS 344
LPL+++ A SS+ P L TP P++S S S
Sbjct: 427 LPLRQLGANSLMGSSTSPRPLTTPPPTESNQSSSSSSSS 465
>AE014297-4270|AAF56817.1| 621|Drosophila melanogaster CG1523-PA
protein.
Length = 621
Score = 29.5 bits (63), Expect = 4.0
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 228 LPLKKIAAKRARESSSPPAGLVTPQPSDSEGEDEFSKRS 344
LPL+++ A SS+ P L TP P++S S S
Sbjct: 427 LPLRQLGANSLMGSSTSPRPLTTPPPTESNQSSSSSSSS 465
>X76208-1|CAA53800.1| 518|Drosophila melanogaster protein
33-specific exons protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3
Query: 180 PLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQPSDSEGE 323
P PP PP E ++LP + + PP G +EGE
Sbjct: 364 PTPPPPPPPPFEYSIDLPPEGAEVPYVKNYEPPPPGSEPEPVPAAEGE 411
>K02621-1|AAA28968.1| 531|Drosophila melanogaster protein (
D.melanogaster tropomyosingene isoform 33 (9C), exon
10C. ).
Length = 531
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3
Query: 180 PLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQPSDSEGE 323
P PP PP E ++LP + + PP G +EGE
Sbjct: 377 PTPPPPPPPPFEYSIDLPPEGAEVPYVKNYEPPPPGSEPEPVPAAEGE 424
>AY118801-1|AAM50661.1| 761|Drosophila melanogaster GH19726p
protein.
Length = 761
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 411 IMRAHKDGTCSPEPLPPPPAHGMNMLKTLKFKMNRGHS 524
+MR H GT +P+P PP + +L+T + + G S
Sbjct: 37 LMRQHLRGTNAPQPPAIPPTNASRLLQTTRLLVWGGGS 74
>AE014298-1785|AAF48177.1| 761|Drosophila melanogaster CG1824-PA
protein.
Length = 761
Score = 28.7 bits (61), Expect = 7.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 411 IMRAHKDGTCSPEPLPPPPAHGMNMLKTLKFKMNRGHS 524
+MR H GT +P+P PP + +L+T + + G S
Sbjct: 37 LMRQHLRGTNAPQPPAIPPTNASRLLQTTRLLVWGGGS 74
>AE014297-1995|AAS65155.1| 518|Drosophila melanogaster CG4898-PK,
isoform K protein.
Length = 518
Score = 28.7 bits (61), Expect = 7.0
Identities = 14/48 (29%), Positives = 19/48 (39%)
Frame = +3
Query: 180 PLSPPSTPPLMENKVELPLKKIAAKRARESSSPPAGLVTPQPSDSEGE 323
P PP PP E ++LP + + PP G +EGE
Sbjct: 364 PTPPPPPPPPFEYSIDLPPEGAEVPYVKNYEPPPPGSEPEPVPAAEGE 411
>AE014134-625|AAF51094.1| 676|Drosophila melanogaster CG3213-PA
protein.
Length = 676
Score = 28.3 bits (60), Expect = 9.2
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 411 IMRAHKDGTCSPEPLPPPPAHG 476
IM K C P P PPPP G
Sbjct: 220 IMSCKKQPVCVPGPCPPPPCPG 241
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,194,545
Number of Sequences: 53049
Number of extensions: 603877
Number of successful extensions: 3598
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3565
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -