Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0493
         (667 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   3.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   3.0  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   3.0  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    21   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/26 (23%), Positives = 16/26 (61%)
 Frame = +2

Query: 68  KEANIYLDNQWNTYYAGQTVNGRIEY 145
           K  ++Y  +QW  + + + ++ ++EY
Sbjct: 320 KNTHMYKGDQWVAFDSPKAISNKVEY 345


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 523 IQIQCIYYCKCHLGFL 476
           +Q+   Y+C C LGF+
Sbjct: 316 VQLVNDYHCNCKLGFM 331


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 421 MFPFKR*RQDRWQ 383
           +FPF R  Q RWQ
Sbjct: 173 LFPFYRQNQQRWQ 185


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 1   GSPGCRNSARGYLKFYK 51
           GSPG   +A G+L +Y+
Sbjct: 295 GSPGPYTNATGFLAYYE 311


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 444 LTVYLT*PCSPSKDEGRTGGNVQVK 370
           LT Y T   SPS  E   GG   V+
Sbjct: 1   LTPYFTQSTSPSASEAFPGGRTLVE 25


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 55   FFYKILDILVPNSCSPGI 2
            F+  +   LVP +C+PG+
Sbjct: 1221 FYVCVNGHLVPQNCAPGL 1238



 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -2

Query: 228  CLLSYNSV*ASPLILTCMPRTFFGLSKTYSILPFTVCP 115
            C+L  ++    P   T  P T  G      +LP  V P
Sbjct: 2199 CILGRDNDKTKPKPTTMKPTTTIGYEPQEPVLPAEVVP 2236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,820
Number of Sequences: 336
Number of extensions: 4309
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17281430
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)