Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0492
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1284 + 32376870-32376874,32376876-32376935,32377166-323773... 152 2e-37
08_01_0522 - 4545166-4545174,4545295-4545447,4545566-4545727,454... 151 5e-37
01_03_0176 - 13461331-13461573,13464880-13465106,13465214-13465535 30 1.4
09_01_0093 - 1360596-1360625,1363562-1364266 29 4.2
05_03_0036 + 7605138-7605445,7605718-7605805,7606355-7606408,760... 29 4.2
09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110... 28 5.6
04_04_0442 - 25229186-25229568,25229740-25232671 28 5.6
03_05_0362 + 23455372-23455619,23456570-23456966,23457400-23457561 28 5.6
02_05_1159 + 34563779-34564715,34567232-34567399,34567508-34568688 28 5.6
03_05_0795 + 27783813-27785246,27785339-27785591,27786377-27786639 28 7.4
11_04_0064 - 13053642-13053791,13053845-13053915,13054123-130542... 27 9.7
11_02_0063 + 7916048-7917135,7917225-7918690,7920177-7920238,792... 27 9.7
11_02_0062 - 7909343-7909413,7909509-7910974,7911064-7912088,791... 27 9.7
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 27 9.7
04_01_0125 - 1317328-1318049,1318061-1319035,1320994-1321143,132... 27 9.7
>04_04_1284 +
32376870-32376874,32376876-32376935,32377166-32377301,
32377439-32377596,32377791-32377881,32377975-32378094,
32378166-32378234,32378354-32378445,32378578-32378680,
32378761-32378868,32378949-32379011,32379073-32379144,
32379322-32379399,32379478-32379540,32379617-32379680,
32379817-32379902,32380456-32380569,32380760-32380837,
32381068-32381303,32381486-32381576,32381706-32381894,
32382082-32382117
Length = 703
Score = 152 bits (369), Expect = 2e-37
Identities = 88/211 (41%), Positives = 121/211 (57%), Gaps = 10/211 (4%)
Frame = +2
Query: 11 LVNYFGKW----TDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLF-AEKKVEMERP 175
LVNYFGK + + + PVL++KG T +ALYGL +++D+RL+R+F V+ RP
Sbjct: 164 LVNYFGKMDLGGSGVGEIAVYPVLVKKGTTFVALYGLGNIRDERLNRMFQTPHAVQWMRP 223
Query: 176 D-----ETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGHEHDSHICPMKGNKT 340
+ DWFN+ VLHQN + I E LP FLD +VWGHEH+ I P +
Sbjct: 224 ETQDGMSVSDWFNILVLHQNRIKTNPKSAINEHFLPRFLDFIVWGHEHECLIDPQE---V 280
Query: 341 EKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSE 520
F + QPGS+VATSL GEA PKH LLEI ++ T +PL++VRPF + +VL +
Sbjct: 281 PGMGFHITQPGSSVATSLIDGEAKPKHVLLLEIKGNQYRPTKIPLRSVRPFHYAEVVLKD 340
Query: 521 ENIGSEDVNENEKVQEFLKNRVNEAIDEASK 613
E D N+ V E L V I ++S+
Sbjct: 341 E--VDVDPNDQASVLEHLDKIVRNLIKKSSQ 369
>08_01_0522 -
4545166-4545174,4545295-4545447,4545566-4545727,
4545821-4545895,4545974-4546087,4546257-4546339,
4546496-4546556,4546664-4546726,4546804-4546908,
4547454-4547525,4547602-4547664,4547746-4547853,
4547937-4548039,4548131-4548207,4548335-4548403,
4548488-4548607,4548749-4548839,4549020-4549177,
4549696-4549834,4551164-4551186
Length = 615
Score = 151 bits (366), Expect = 5e-37
Identities = 80/194 (41%), Positives = 118/194 (60%), Gaps = 5/194 (2%)
Frame = +2
Query: 14 VNYFGKW----TDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLF-AEKKVEMERPD 178
VNYFGK +D + + PV ++KG T +ALYGL +++D++LSR+ K++ + D
Sbjct: 152 VNYFGKVDPGSSDVDQISVCPVFIKKGATSVALYGLGNIRDEKLSRMLQTHYKIQWMKAD 211
Query: 179 ETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGHEHDSHICPMKGNKTEKDSFF 358
DWFNLFV HQ +N I E +LP+FLDLV+WGHEH+ C + + F
Sbjct: 212 SEDDWFNLFVFHQKRRKGSSTNGINEQLLPSFLDLVIWGHEHE---CLIDHQEVSGKDFH 268
Query: 359 VVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIGSE 538
++ PGS+VATSL+ EA PK+ LLEI +K T +PL++VRPF + + L ++ +G E
Sbjct: 269 IIHPGSSVATSLSNAEAKPKNVVLLEIKGMQYKQTNIPLKSVRPFQYAEVQLKDQ-LGVE 327
Query: 539 DVNENEKVQEFLKN 580
+N + E L N
Sbjct: 328 -LNNEAALYEHLDN 340
>01_03_0176 - 13461331-13461573,13464880-13465106,13465214-13465535
Length = 263
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 221 HADRGHSNYIPEGVLPNFLDLVVWGHEHDSHICP 322
H D+G ++PEGV P + +LV +H S++ P
Sbjct: 129 HQDKGPV-FLPEGVFPPYRNLVTGNKQHASNVPP 161
>09_01_0093 - 1360596-1360625,1363562-1364266
Length = 244
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +2
Query: 245 YIPEGVLPNFLDLVVWGHEHDSH 313
Y+P GV PN+ +LV+ +H S+
Sbjct: 189 YLPGGVFPNYRNLVIGNQQHASN 211
>05_03_0036 +
7605138-7605445,7605718-7605805,7606355-7606408,
7606860-7606910,7607625-7607642
Length = 172
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +2
Query: 248 IPEGVLPNFLDLVVWGHEHDSHICPMKGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCG 427
+P +L + +LV+WG D I KG SFFVV S++ L G C
Sbjct: 78 VPPNILRDAWELVIWGLLQDGGISLRKG------SFFVVYDRSSLLDQLLFGTPHSSCCV 131
Query: 428 LLEIH 442
L ++
Sbjct: 132 LKRLN 136
>09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,
1107272-1107531,1107897-1108084,1108187-1108311,
1108485-1108521,1108802-1108893,1109023-1109133,
1109242-1109352,1109576-1109669,1109833-1109945,
1110316-1110411,1110510-1110617,1110665-1110814,
1110910-1110990,1111205-1111276,1111553-1111646,
1111759-1111787,1111870-1111967,1112065-1112160,
1112399-1112620,1113002-1113158,1113472-1113627,
1113703-1113930
Length = 1045
Score = 28.3 bits (60), Expect = 5.6
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 126 RDFHVFLLKKKWKWRDPMK 182
R H +LL+ KWKW+ P K
Sbjct: 997 RSHHQWLLQFKWKWQKPWK 1015
>04_04_0442 - 25229186-25229568,25229740-25232671
Length = 1104
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = +2
Query: 107 LSHLKDQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLV 286
+ LK+ + RL + + P E + NL V G G L N DL+
Sbjct: 191 IGRLKNLKTVRL-GQNAISGNIPVEIGECLNLVVFGLAQNKLGGPLPKEIGKLTNMTDLI 249
Query: 287 VWGHEHDSHICPMKGN 334
+WG++ S I P GN
Sbjct: 250 LWGNQLSSVIPPEIGN 265
>03_05_0362 + 23455372-23455619,23456570-23456966,23457400-23457561
Length = 268
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = -1
Query: 471 GRGVNLKFPLCISNKPQCLGSASPAAKEVATVLPGCTTKKLSFS 340
G L FP C+ P +G P A T G LS S
Sbjct: 46 GMDACLSFPACVDPLPPAIGRGGPEASPTVTTTMGLGRLSLSVS 89
>02_05_1159 + 34563779-34564715,34567232-34567399,34567508-34568688
Length = 761
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 420 CLGSASPAAKEVATVLPGCTTKKLSFSVLFPF 325
C + +PAA LPGC K S+ +PF
Sbjct: 19 CAAAVTPAASAQQQQLPGCPDKCGDISIPYPF 50
>03_05_0795 + 27783813-27785246,27785339-27785591,27786377-27786639
Length = 649
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +2
Query: 371 GSTVATSLAAGEAL-PKHCGLLEIHKGNFKLTPLPLQTVRPFIFKT 505
G +A +AA A P L++ F + PLPLQT PF+F+T
Sbjct: 366 GLDLACMVAATAAHHPDPDALVKFFMSTFSMKPLPLQT-DPFMFQT 410
>11_04_0064 -
13053642-13053791,13053845-13053915,13054123-13054227,
13054269-13054275,13054614-13054906,13055064-13055142,
13055322-13055551,13055646-13055792,13055988-13056067,
13056318-13056651,13057155-13057227,13057727-13057750,
13058297-13058497
Length = 597
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 164 MERPDETLDWFNLFVLHQNHADRGHSNYIPEGVL 265
M++ LDW +L + + +A+ H N+ PE +L
Sbjct: 507 MDKGGWDLDWLHLLLHKKANAETNHVNHHPEHIL 540
>11_02_0063 +
7916048-7917135,7917225-7918690,7920177-7920238,
7921808-7922407
Length = 1071
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 203 FVLHQNHADRGHSNYIPEGVLPNFLDLVVWGHEHDSHICPMKGN 334
F+L Q A RGH NFL+++ W E D + GN
Sbjct: 262 FLLLQALAFRGHDESHGSSNKGNFLEMIEWYKEKDKDAQKLLGN 305
>11_02_0062 -
7909343-7909413,7909509-7910974,7911064-7912088,
7912300-7912809,7913418-7913441,7913617-7913673
Length = 1050
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +2
Query: 203 FVLHQNHADRGHSNYIPEGVLPNFLDLVVWGHEHDSHICPMKGN 334
F+L Q A RGH NFL+++ W E D + GN
Sbjct: 438 FLLLQALAFRGHDESHGSSNKGNFLEMIEWYKEKDKDAQKLLGN 481
>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/58 (25%), Positives = 26/58 (44%)
Frame = +2
Query: 452 FKLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTA 625
F + LPL+T I SE ++ +++ +NE+ + L R N D T+
Sbjct: 1623 FTMAELPLETALMSTLSGITSSEASLSIKNLPKNERGNDSLHYRCNAVTDGEQSCHTS 1680
>04_01_0125 -
1317328-1318049,1318061-1319035,1320994-1321143,
1322242-1322546,1323447-1323565
Length = 756
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/70 (24%), Positives = 27/70 (38%)
Frame = +2
Query: 122 DQRLSRLFAEKKVEMERPDETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGHE 301
+ L + ++E E + W LF L + N G++P FL V
Sbjct: 227 NSELHSIVLSNNCKLEIETELVRWTPLFQLEYLNLSNSIVNKRSNGIIPTFLSAQVSLSG 286
Query: 302 HDSHICPMKG 331
D IC ++G
Sbjct: 287 IDLSICSLQG 296
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,677,232
Number of Sequences: 37544
Number of extensions: 321094
Number of successful extensions: 889
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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