Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0492
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   3.6  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    24   3.6  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    23   8.3  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 194 TSPMFHRVSPFPLFFQQKDVKVS 126
           T+ +  ++S FP+F +  +VKVS
Sbjct: 890 TTKLIPKISSFPIFTRSGEVKVS 912


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/70 (18%), Positives = 33/70 (47%)
 Frame = +2

Query: 2   ITGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDE 181
           ++GL+   G+        ++PV++Q  + RL +  +  +  + ++ +   +  + E P +
Sbjct: 139 LSGLITTQGETWQQLRTIVNPVMMQPKIIRLYVDQVDAVAREFMTIVAELRDAKCEVPAD 198

Query: 182 TLDWFNLFVL 211
              W N + L
Sbjct: 199 FNQWLNRWAL 208


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/68 (19%), Positives = 30/68 (44%)
 Frame = +2

Query: 8   GLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDETL 187
           GLV   G+        ++PV++Q    +L +  +  +  + ++ +   +  + E P +  
Sbjct: 144 GLVTEHGEKWQKVRTIVNPVMMQPKTIKLYVDQVDEIAREFMTLVAGMRDEKNELPKDFD 203

Query: 188 DWFNLFVL 211
            W N + L
Sbjct: 204 QWLNRWAL 211


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,124
Number of Sequences: 2352
Number of extensions: 12850
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)