Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0492
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF132144-1|AAD33591.1| 620|Drosophila melanogaster endo/exonucl... 224 9e-59
AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-P... 224 9e-59
AM294540-1|CAL26523.1| 431|Drosophila melanogaster CG3975 protein. 31 1.8
X53992-1|CAA37939.1| 1645|Drosophila melanogaster betaH spectrin... 28 9.5
BT011336-1|AAR96128.1| 914|Drosophila melanogaster SD02170p pro... 28 9.5
BT001607-1|AAN71362.1| 604|Drosophila melanogaster RE31467p pro... 28 9.5
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro... 28 9.5
AE014297-1836|AAN13604.1| 601|Drosophila melanogaster CG31321-P... 28 9.5
AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA... 28 9.5
AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB... 28 9.5
AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC... 28 9.5
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC... 28 9.5
AE013599-3654|AAM68265.1| 904|Drosophila melanogaster CG5411-PB... 28 9.5
AE013599-3653|AAM68264.1| 805|Drosophila melanogaster CG5411-PD... 28 9.5
AE013599-3651|AAM68263.1| 914|Drosophila melanogaster CG5411-PA... 28 9.5
AE013599-3484|AAF46911.1| 495|Drosophila melanogaster CG9826-PA... 28 9.5
>AF132144-1|AAD33591.1| 620|Drosophila melanogaster
endo/exonuclease Mre11 protein.
Length = 620
Score = 224 bits (547), Expect = 9e-59
Identities = 113/228 (49%), Positives = 154/228 (67%), Gaps = 14/228 (6%)
Frame = +2
Query: 5 TGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD-- 178
+GLVNYFG+WTD T V ISPVL++KG ++LALYGLSH+ D RL+RL + KV+ P+
Sbjct: 149 SGLVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHDGRLARLIKDFKVKFNCPENV 208
Query: 179 ----------ETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGHEHDSHICPMK 328
E DWF+L V+HQN ADRG NY+PE +LP+FL LV+WGHEHD C ++
Sbjct: 209 ANGEDGNESKEEEDWFHLLVVHQNRADRGPKNYLPEDLLPSFLHLVIWGHEHD---CRIE 265
Query: 329 GNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTI 508
+ K F+V QPGS+V TSL+ GEA KH GLLEI+KG FKL PLPL+TVRPF+++++
Sbjct: 266 PEENAKKRFYVSQPGSSVPTSLSEGEAKKKHVGLLEIYKGKFKLKPLPLETVRPFVYESV 325
Query: 509 VLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQXLL 646
VL++ + +G + + + KV +F + RV I+ A T +Q L
Sbjct: 326 VLADHADELGLVEGDASTKVFKFAQERVEAMIERAVAQHTGHPKQPTL 373
>AE014134-2061|AAF53093.1| 620|Drosophila melanogaster CG16928-PA
protein.
Length = 620
Score = 224 bits (547), Expect = 9e-59
Identities = 113/228 (49%), Positives = 154/228 (67%), Gaps = 14/228 (6%)
Frame = +2
Query: 5 TGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPD-- 178
+GLVNYFG+WTD T V ISPVL++KG ++LALYGLSH+ D RL+RL + KV+ P+
Sbjct: 149 SGLVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIHDGRLARLIKDFKVKFNCPENV 208
Query: 179 ----------ETLDWFNLFVLHQNHADRGHSNYIPEGVLPNFLDLVVWGHEHDSHICPMK 328
E DWF+L V+HQN ADRG NY+PE +LP+FL LV+WGHEHD C ++
Sbjct: 209 ANGEDGNESKEEEDWFHLLVVHQNRADRGPKNYLPEDLLPSFLHLVIWGHEHD---CRIE 265
Query: 329 GNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTI 508
+ K F+V QPGS+V TSL+ GEA KH GLLEI+KG FKL PLPL+TVRPF+++++
Sbjct: 266 PEENAKKRFYVSQPGSSVPTSLSEGEAKKKHVGLLEIYKGKFKLKPLPLETVRPFVYESV 325
Query: 509 VLSE--ENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQXLL 646
VL++ + +G + + + KV +F + RV I+ A T +Q L
Sbjct: 326 VLADHADELGLVEGDASTKVFKFAQERVEAMIERAVAQHTGHPKQPTL 373
>AM294540-1|CAL26523.1| 431|Drosophila melanogaster CG3975 protein.
Length = 431
Score = 30.7 bits (66), Expect = 1.8
Identities = 24/111 (21%), Positives = 48/111 (43%)
Frame = +2
Query: 305 DSHICPMKGNKTEKDSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTV 484
D P K D+FF QP + +G+ K + + K +P P T
Sbjct: 225 DVKATPSKSTSGTMDNFFKKQPAGAKKSPPESGDKSKKDASNSNKKEASKKKSPSP--TK 282
Query: 485 RPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQ 637
+P T + + +E +E EK+ + L+ +V E+ +++ + K + ++
Sbjct: 283 KPTTANTSMQLFDEESAESSDEEEKL-DMLRRKVIESDNDSDQEKASSSKR 332
>X53992-1|CAA37939.1| 1645|Drosophila melanogaster betaH spectrin
protein.
Length = 1645
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 467 LPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQXLL 646
+P++ ++P L + ++ +NEN E + R+N+ DE ++ A R LL
Sbjct: 930 VPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEM--AQKRHALL 987
>BT011336-1|AAR96128.1| 914|Drosophila melanogaster SD02170p
protein.
Length = 914
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 455 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLK 577
KLT LPL+ I + +EN +++ +KV EFLK
Sbjct: 466 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK 506
>BT001607-1|AAN71362.1| 604|Drosophila melanogaster RE31467p
protein.
Length = 604
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 455 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLK 577
KLT LPL+ I + +EN +++ +KV EFLK
Sbjct: 456 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK 496
>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
Length = 16215
Score = 28.3 bits (60), Expect = 9.5
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -1
Query: 441 CISNKPQCLGSASPAAKEVATVLPGCTTKKLSFSVLFPFIGQIWLSCSWPHTTRSKKF 268
CI++ P +G S A+ + V TKKL ++ + + L C H +K F
Sbjct: 14970 CIASNP--IGKTSHGARVIVEVDEVTFTKKLKKTITIEEVQSLTLECETSHVVTTKWF 15025
>AE014297-1836|AAN13604.1| 601|Drosophila melanogaster CG31321-PB
protein.
Length = 601
Score = 28.3 bits (60), Expect = 9.5
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -3
Query: 106 SIEGEPRKTFLQKYW*YSYVRVVGPF 29
+++ EP+ + QK W Y + V+ PF
Sbjct: 17 AVDAEPKLNYFQKLWRYRHYLVIEPF 42
>AE014296-651|AAF47766.1| 4097|Drosophila melanogaster CG12008-PA,
isoform A protein.
Length = 4097
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 467 LPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQXLL 646
+P++ ++P L + ++ +NEN E + R+N+ DE ++ A R LL
Sbjct: 917 VPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEM--AQKRHALL 974
>AE014296-650|AAS64958.1| 4118|Drosophila melanogaster CG12008-PB,
isoform B protein.
Length = 4118
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 467 LPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQXLL 646
+P++ ++P L + ++ +NEN E + R+N+ DE ++ A R LL
Sbjct: 917 VPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEM--AQKRHALL 974
>AE014296-649|AAS64957.1| 4207|Drosophila melanogaster CG12008-PC,
isoform C protein.
Length = 4207
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +2
Query: 467 LPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLKNRVNEAIDEASKLKTADLRQXLL 646
+P++ ++P L + ++ +NEN E + R+N+ DE ++ A R LL
Sbjct: 917 VPVKRIKPVSVAPKPLVQRRTSTQSINENADSVEKRQQRINQTYDELQEM--AQKRHALL 974
>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
isoform C protein.
Length = 18074
Score = 28.3 bits (60), Expect = 9.5
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -1
Query: 441 CISNKPQCLGSASPAAKEVATVLPGCTTKKLSFSVLFPFIGQIWLSCSWPHTTRSKKF 268
CI++ P +G S A+ + V TKKL ++ + + L C H +K F
Sbjct: 16829 CIASNP--IGKTSHGARVIVEVDEVTFTKKLKKTITIEEVQSLTLECETSHVVTTKWF 16884
>AE013599-3654|AAM68265.1| 904|Drosophila melanogaster CG5411-PB,
isoform B protein.
Length = 904
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 455 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLK 577
KLT LPL+ I + +EN +++ +KV EFLK
Sbjct: 456 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK 496
>AE013599-3653|AAM68264.1| 805|Drosophila melanogaster CG5411-PD,
isoform D protein.
Length = 805
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 455 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLK 577
KLT LPL+ I + +EN +++ +KV EFLK
Sbjct: 357 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK 397
>AE013599-3651|AAM68263.1| 914|Drosophila melanogaster CG5411-PA,
isoform A protein.
Length = 914
Score = 28.3 bits (60), Expect = 9.5
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 455 KLTPLPLQTVRPFIFKTIVLSEENIGSEDVNENEKVQEFLK 577
KLT LPL+ I + +EN +++ +KV EFLK
Sbjct: 466 KLTSLPLEAPITKIINLLSQVQENCSADEARLIDKVLEFLK 506
>AE013599-3484|AAF46911.1| 495|Drosophila melanogaster CG9826-PA,
isoform A protein.
Length = 495
Score = 28.3 bits (60), Expect = 9.5
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +2
Query: 362 VQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEENIG 532
V G+T+ +SL + + P H G+L I N +P+ T P I IV + N G
Sbjct: 362 VNSGATIGSSLNSIDLSPNHAGIL-IGLSNTVANVIPILT--PLIAGEIVADKHNRG 415
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,731,449
Number of Sequences: 53049
Number of extensions: 570594
Number of successful extensions: 1587
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1583
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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