BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NRPG0492 (648 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical pr... 163 1e-40 U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 30 1.2 Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical pr... 28 5.0 Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical p... 28 5.0 Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical pr... 28 5.0 Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical pr... 28 5.0 AB011285-1|BAA24965.1| 275|Caenorhabditis elegans GAP-2-9 protein. 28 5.0 Z75530-2|CAA99795.2| 351|Caenorhabditis elegans Hypothetical pr... 28 6.6 Z69717-3|CAA93534.1| 617|Caenorhabditis elegans Hypothetical pr... 27 8.7 U61946-9|AAC24393.1| 202|Caenorhabditis elegans Hypothetical pr... 27 8.7 AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical ... 27 8.7 >Z73978-2|CAA98292.2| 728|Caenorhabditis elegans Hypothetical protein ZC302.1 protein. Length = 728 Score = 163 bits (396), Expect = 1e-40 Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 7/208 (3%) Frame = +2 Query: 5 TGLVNYFGKWTDYTHVRISPVLLQKGLTRLALYGLSHLKDQRLSRLFAEKKVEMERPDET 184 +GLVN FGK ++ +SP+LL+KG TRLALYG+ +D RL R F + RP+ Sbjct: 199 SGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGIGSQRDDRLVRAFKNNSISFLRPNAG 258 Query: 185 L-DWFNLFVLHQNHADRG-H---SNYIPEGVLPNFLDLVVWGHEHDSHICPMKGNKTEK- 346 DWFNLFVLHQN R H N++PE ++P F DL++WGHEH+ P +E Sbjct: 259 AEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQFFDLLIWGHEHECKPDPQYVASSEAV 318 Query: 347 -DSFFVVQPGSTVATSLAAGEALPKHCGLLEIHKGNFKLTPLPLQTVRPFIFKTIVLSEE 523 D F+++QPGSTVATSL EAL K+ L++I F P+PLQTVRP + ++L + Sbjct: 319 GDGFYILQPGSTVATSLTPEEALQKNAFLIKIKGRKFASKPIPLQTVRPMVCDELLLDKI 378 Query: 524 NIGSEDVNENEKVQEFLKNRVNEAIDEA 607 GS + + ++ + ++E EA Sbjct: 379 PPGSRPILKTDRPKHTDGRYIDEIAIEA 406 >U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical protein F47E1.4 protein. Length = 728 Score = 30.3 bits (65), Expect = 1.2 Identities = 13/47 (27%), Positives = 28/47 (59%), Gaps = 3/47 (6%) Frame = +2 Query: 491 FIFKTIVLSEENIGSEDVNEN---EKVQEFLKNRVNEAIDEASKLKT 622 ++ K I++ +N+ + ++N + + F+ RVN +ID+ K+KT Sbjct: 178 YLMKGILIEADNLVKNNYSQNSIKQLLSMFIHRRVNRSIDDIQKMKT 224 >Z83219-7|CAB05698.2| 473|Caenorhabditis elegans Hypothetical protein C31C9.1a protein. Length = 473 Score = 28.3 bits (60), Expect = 5.0 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = -1 Query: 447 PLCISNKPQCLGSASPAAKEVATVLPGCTTKKLSFSVLFPFIGQIWLSC 301 P + P +A+PAA V T PG TT + L + ++C Sbjct: 423 PTVTTTTPGTPSTAAPAAPTVTTTTPGTTTSPSAHLSLLSMFSLLLIAC 471 >Z80217-10|CAB02296.2| 473|Caenorhabditis elegans Hypothetical protein C31C9.1a protein. Length = 473 Score = 28.3 bits (60), Expect = 5.0 Identities = 14/49 (28%), Positives = 21/49 (42%) Frame = -1 Query: 447 PLCISNKPQCLGSASPAAKEVATVLPGCTTKKLSFSVLFPFIGQIWLSC 301 P + P +A+PAA V T PG TT + L + ++C Sbjct: 423 PTVTTTTPGTPSTAAPAAPTVTTTTPGTTTSPSAHLSLLSMFSLLLIAC 471 >Z46266-9|CAO78710.1| 790|Caenorhabditis elegans Hypothetical protein ZK899.8j protein. Length = 790 Score = 28.3 bits (60), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 488 PFIFKTIVLSEENIGSEDVNENEKVQEFLKN 580 P+ +I S EN+ E NEN K++ LKN Sbjct: 19 PYSLASIYPSIENLPEEFSNENNKIKNVLKN 49 >Z46266-4|CAA86414.2| 787|Caenorhabditis elegans Hypothetical protein ZK899.8g protein. Length = 787 Score = 28.3 bits (60), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 488 PFIFKTIVLSEENIGSEDVNENEKVQEFLKN 580 P+ +I S EN+ E NEN K++ LKN Sbjct: 19 PYSLASIYPSIENLPEEFSNENNKIKNVLKN 49 >AB011285-1|BAA24965.1| 275|Caenorhabditis elegans GAP-2-9 protein. Length = 275 Score = 28.3 bits (60), Expect = 5.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 488 PFIFKTIVLSEENIGSEDVNENEKVQEFLKN 580 P+ +I S EN+ E NEN K++ LKN Sbjct: 19 PYSLASIYPSIENLPEEFSNENNKIKNVLKN 49 >Z75530-2|CAA99795.2| 351|Caenorhabditis elegans Hypothetical protein C47E8.4 protein. Length = 351 Score = 27.9 bits (59), Expect = 6.6 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -1 Query: 423 QCLGSASPAAKEVATVLPGCTTKKLSF 343 QCLG A A K+ T L CT + L F Sbjct: 233 QCLGRAIEALKKEFTELKSCTAENLMF 259 >Z69717-3|CAA93534.1| 617|Caenorhabditis elegans Hypothetical protein H19J13.1 protein. Length = 617 Score = 27.5 bits (58), Expect = 8.7 Identities = 9/29 (31%), Positives = 17/29 (58%) Frame = -2 Query: 317 KYGYHAHGPTLQDLKSLVALLLEYSYCVL 231 +Y HAHG + ++ ++ L+ E YC + Sbjct: 426 QYRLHAHGEVIDEILLIIGLIGEILYCAV 454 >U61946-9|AAC24393.1| 202|Caenorhabditis elegans Hypothetical protein F47C12.8 protein. Length = 202 Score = 27.5 bits (58), Expect = 8.7 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = +3 Query: 171 DP-MKHWTGSIYLYYIKIMLTEDTVTIFQKEC 263 DP +KHW G++Y+Y T D V QK C Sbjct: 30 DPAIKHWCGTLYVYEEDFSPTHDAVDT-QKFC 60 >AL009170-1|CAA15637.1| 617|Caenorhabditis elegans Hypothetical protein H19J13.1 protein. Length = 617 Score = 27.5 bits (58), Expect = 8.7 Identities = 9/29 (31%), Positives = 17/29 (58%) Frame = -2 Query: 317 KYGYHAHGPTLQDLKSLVALLLEYSYCVL 231 +Y HAHG + ++ ++ L+ E YC + Sbjct: 426 QYRLHAHGEVIDEILLIIGLIGEILYCAV 454 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,009,656 Number of Sequences: 27780 Number of extensions: 299724 Number of successful extensions: 810 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 791 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 807 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1434198608 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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