Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0490
         (522 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1C5G9 Cluster: DUF221 domain protein; n=4; Trichocomac...    34   2.3  
UniRef50_A5DG13 Cluster: Putative uncharacterized protein; n=1; ...    33   4.0  
UniRef50_Q4WE55 Cluster: DUF221 domain protein, putative; n=3; T...    32   6.9  
UniRef50_Q4HIY4 Cluster: Imidazole glycerol phosphate synthase, ...    32   9.2  
UniRef50_Q11P88 Cluster: Putative uncharacterized protein; n=1; ...    32   9.2  
UniRef50_A4XGW4 Cluster: ABC-2 type transporter precursor; n=1; ...    32   9.2  

>UniRef50_A1C5G9 Cluster: DUF221 domain protein; n=4;
           Trichocomaceae|Rep: DUF221 domain protein - Aspergillus
           clavatus
          Length = 873

 Score = 33.9 bits (74), Expect = 2.3
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +3

Query: 384 VYCKVHALSLSHVCLSSVDMYINIVGFFLYYNEFKFKFKFVY 509
           V+  +  ++L++ C++ + +    +G FL Y  +++ F FVY
Sbjct: 620 VFTNMGVIALTYACIAPLILGFAFIGLFLVYQAYRYNFLFVY 661


>UniRef50_A5DG13 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 558

 Score = 33.1 bits (72), Expect = 4.0
 Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -3

Query: 277 IWLLPIIYVQGSYCRLVTFFFQASICLRMNTIIIREC-AIVLQFQISIKKQT 125
           + L+PI+ +  S+C   + F    +C+RM  III E  A  L+ +I++   T
Sbjct: 363 VLLMPIVKIFDSFCSGCSLFMGRRVCVRMRAIIIGEVYAKALRRRITVADDT 414


>UniRef50_Q4WE55 Cluster: DUF221 domain protein, putative; n=3;
           Trichocomaceae|Rep: DUF221 domain protein, putative -
           Aspergillus fumigatus (Sartorya fumigata)
          Length = 870

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 11/42 (26%), Positives = 25/42 (59%)
 Frame = +3

Query: 384 VYCKVHALSLSHVCLSSVDMYINIVGFFLYYNEFKFKFKFVY 509
           V+  +  ++L++ C++ + +    VG +L Y  +++ F FVY
Sbjct: 625 VFTNMGVIALTYSCIAPLILGFAFVGLYLVYQAYRYNFLFVY 666


>UniRef50_Q4HIY4 Cluster: Imidazole glycerol phosphate synthase,
           glutamine amidotransferase subunit; n=2;
           Campylobacter|Rep: Imidazole glycerol phosphate
           synthase, glutamine amidotransferase subunit -
           Campylobacter lari RM2100
          Length = 193

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 223 FFFQASICLRMNTIIIRECAIVLQFQISIKKQTSYNIK 110
           F+F  S C+ +N   I EC   ++F  S+ K   Y ++
Sbjct: 136 FYFVHSYCVSLNEYTIAECEYSIKFSASLNKDNFYGVQ 173


>UniRef50_Q11P88 Cluster: Putative uncharacterized protein; n=1;
           Cytophaga hutchinsonii ATCC 33406|Rep: Putative
           uncharacterized protein - Cytophaga hutchinsonii (strain
           ATCC 33406 / NCIMB 9469)
          Length = 357

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 363 DISTLLLVYCKVHALSLSHVCLSSVDMYINIVGFFLYYNEFKFKF 497
           D +T L++ C+ + L+     L  +D+Y+N + + L  N + FK+
Sbjct: 99  DNATALVIMCEHYELTREKTDLELIDIYLNFIQYCLQPNGYFFKY 143


>UniRef50_A4XGW4 Cluster: ABC-2 type transporter precursor; n=1;
           Caldicellulosiruptor saccharolyticus DSM 8903|Rep: ABC-2
           type transporter precursor - Caldicellulosiruptor
           saccharolyticus (strain ATCC 43494 / DSM 8903)
          Length = 370

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = +1

Query: 97  LQYFFLYCSLFVFLLKFGTGVQLRTHVLLLCSFLDIS 207
           L +F L CS + F L FGT + +   VL +CSF+ ++
Sbjct: 234 LIFFVLLCS-YAFRLTFGTNILIVISVLSICSFMFVA 269


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,643,528
Number of Sequences: 1657284
Number of extensions: 7041774
Number of successful extensions: 15127
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15119
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)