Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0490
(522 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54130-1|CAA38065.1| 793|Homo sapiens protein-tyrosine phosphat... 30 5.7
X53364-1|CAA37447.1| 793|Homo sapiens tyrosine phosphatase prec... 30 5.7
M34668-1|AAA36528.1| 802|Homo sapiens protein ( Human protein t... 30 5.7
BC027308-1|AAH27308.1| 793|Homo sapiens protein tyrosine phosph... 30 5.7
AL121905-6|CAC10336.1| 802|Homo sapiens protein tyrosine phosph... 30 5.7
AL121905-5|CAC10337.1| 793|Homo sapiens protein tyrosine phosph... 30 5.7
AB209702-1|BAD92939.1| 651|Homo sapiens protein tyrosine phosph... 30 5.7
BC127005-1|AAI27006.1| 823|Homo sapiens egf-like module contain... 29 7.5
BC127004-1|AAI27005.1| 823|Homo sapiens egf-like module contain... 29 7.5
AK222891-1|BAD96611.1| 810|Homo sapiens egf-like module contain... 29 7.5
AK024454-1|BAB15744.1| 169|Homo sapiens FLJ00046 protein protein. 29 7.5
AK024426-1|BAB15716.1| 307|Homo sapiens FLJ00015 protein protein. 29 7.5
AF114491-1|AAF21974.1| 823|Homo sapiens EGF-like module EMR2 pr... 29 7.5
AC004262-1|AAC05172.1| 344|Homo sapiens R29368_2 protein. 29 7.5
AB065931-1|BAC06146.1| 837|Homo sapiens seven transmembrane hel... 29 7.5
>X54130-1|CAA38065.1| 793|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 793
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 61 VRAGRCN*V*TDLQYFFLYCSLFVFLLKFGTGVQ---LRTHV 177
+RA RC V TD+QY F+Y +L L T ++ L TH+
Sbjct: 468 IRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETHL 509
>X53364-1|CAA37447.1| 793|Homo sapiens tyrosine phosphatase
precursor protein.
Length = 793
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 61 VRAGRCN*V*TDLQYFFLYCSLFVFLLKFGTGVQ---LRTHV 177
+RA RC V TD+QY F+Y +L L T ++ L TH+
Sbjct: 468 IRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETHL 509
>M34668-1|AAA36528.1| 802|Homo sapiens protein ( Human protein
tyrosine phosphatase (PTPase-alpha) mRNA. ).
Length = 802
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 61 VRAGRCN*V*TDLQYFFLYCSLFVFLLKFGTGVQ---LRTHV 177
+RA RC V TD+QY F+Y +L L T ++ L TH+
Sbjct: 477 IRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETHL 518
>BC027308-1|AAH27308.1| 793|Homo sapiens protein tyrosine
phosphatase, receptor type, A protein.
Length = 793
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 61 VRAGRCN*V*TDLQYFFLYCSLFVFLLKFGTGVQ---LRTHV 177
+RA RC V TD+QY F+Y +L L T ++ L TH+
Sbjct: 468 IRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETHL 509
>AL121905-6|CAC10336.1| 802|Homo sapiens protein tyrosine
phosphatase, receptor type, A protein.
Length = 802
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 61 VRAGRCN*V*TDLQYFFLYCSLFVFLLKFGTGVQ---LRTHV 177
+RA RC V TD+QY F+Y +L L T ++ L TH+
Sbjct: 477 IRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETHL 518
>AL121905-5|CAC10337.1| 793|Homo sapiens protein tyrosine
phosphatase, receptor type, A protein.
Length = 793
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 61 VRAGRCN*V*TDLQYFFLYCSLFVFLLKFGTGVQ---LRTHV 177
+RA RC V TD+QY F+Y +L L T ++ L TH+
Sbjct: 468 IRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETHL 509
>AB209702-1|BAD92939.1| 651|Homo sapiens protein tyrosine
phosphatase, receptor type, A isoform 2 precursor
variant protein.
Length = 651
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 61 VRAGRCN*V*TDLQYFFLYCSLFVFLLKFGTGVQ---LRTHV 177
+RA RC V TD+QY F+Y +L L T ++ L TH+
Sbjct: 326 IRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETHL 367
>BC127005-1|AAI27006.1| 823|Homo sapiens egf-like module
containing, mucin-like, hormone receptor-like 2 protein.
Length = 823
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 280 RIWLLPIIYVQGSYCRLVTFFFQASICLRMNTI-IIRECAIVLQFQISIKKQTSYNIKKN 104
R WL P + V F ++ L + T+ I++ L ++S + T K
Sbjct: 675 RCWLQPEKGFIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKA 734
Query: 103 IASQFILNCTYPHGLTR-GPAA 41
A FIL CT+ G+ + GPAA
Sbjct: 735 TAQLFILGCTWCLGILQVGPAA 756
>BC127004-1|AAI27005.1| 823|Homo sapiens egf-like module
containing, mucin-like, hormone receptor-like 2 protein.
Length = 823
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 280 RIWLLPIIYVQGSYCRLVTFFFQASICLRMNTI-IIRECAIVLQFQISIKKQTSYNIKKN 104
R WL P + V F ++ L + T+ I++ L ++S + T K
Sbjct: 675 RCWLQPEKGFIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKA 734
Query: 103 IASQFILNCTYPHGLTR-GPAA 41
A FIL CT+ G+ + GPAA
Sbjct: 735 TAQLFILGCTWCLGILQVGPAA 756
>AK222891-1|BAD96611.1| 810|Homo sapiens egf-like module
containing, mucin-like, hormone receptor-like sequence 2
isofor protein.
Length = 810
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 280 RIWLLPIIYVQGSYCRLVTFFFQASICLRMNTI-IIRECAIVLQFQISIKKQTSYNIKKN 104
R WL P + V F ++ L + T+ I++ L ++S + T K
Sbjct: 664 RCWLQPEKGFIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKA 723
Query: 103 IASQFILNCTYPHGLTR-GPAA 41
A FIL CT+ G+ + GPAA
Sbjct: 724 TAQLFILGCTWCLGILQVGPAA 745
>AK024454-1|BAB15744.1| 169|Homo sapiens FLJ00046 protein protein.
Length = 169
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 280 RIWLLPIIYVQGSYCRLVTFFFQASICLRMNTI-IIRECAIVLQFQISIKKQTSYNIKKN 104
R WL P + V F ++ L + T+ I++ L ++S + T K
Sbjct: 21 RCWLQPEKGFIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKA 80
Query: 103 IASQFILNCTYPHGLTR-GPAA 41
A FIL CT+ G+ + GPAA
Sbjct: 81 TAQLFILGCTWCLGILQVGPAA 102
>AK024426-1|BAB15716.1| 307|Homo sapiens FLJ00015 protein protein.
Length = 307
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 280 RIWLLPIIYVQGSYCRLVTFFFQASICLRMNTI-IIRECAIVLQFQISIKKQTSYNIKKN 104
R WL P + V F ++ L + T+ I++ L ++S + T K
Sbjct: 159 RCWLQPEKGFIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKA 218
Query: 103 IASQFILNCTYPHGLTR-GPAA 41
A FIL CT+ G+ + GPAA
Sbjct: 219 TAQLFILGCTWCLGILQVGPAA 240
>AF114491-1|AAF21974.1| 823|Homo sapiens EGF-like module EMR2
protein.
Length = 823
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 280 RIWLLPIIYVQGSYCRLVTFFFQASICLRMNTI-IIRECAIVLQFQISIKKQTSYNIKKN 104
R WL P + V F ++ L + T+ I++ L ++S + T K
Sbjct: 675 RCWLQPEKGFIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKA 734
Query: 103 IASQFILNCTYPHGLTR-GPAA 41
A FIL CT+ G+ + GPAA
Sbjct: 735 TAQLFILGCTWCLGILQVGPAA 756
>AC004262-1|AAC05172.1| 344|Homo sapiens R29368_2 protein.
Length = 344
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 280 RIWLLPIIYVQGSYCRLVTFFFQASICLRMNTI-IIRECAIVLQFQISIKKQTSYNIKKN 104
R WL P + V F ++ L + T+ I++ L ++S + T K
Sbjct: 196 RCWLQPEKGFIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKA 255
Query: 103 IASQFILNCTYPHGLTR-GPAA 41
A FIL CT+ G+ + GPAA
Sbjct: 256 TAQLFILGCTWCLGILQVGPAA 277
>AB065931-1|BAC06146.1| 837|Homo sapiens seven transmembrane helix
receptor protein.
Length = 837
Score = 29.5 bits (63), Expect = 7.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = -3
Query: 280 RIWLLPIIYVQGSYCRLVTFFFQASICLRMNTI-IIRECAIVLQFQISIKKQTSYNIKKN 104
R WL P + V F ++ L + T+ I++ L ++S + T K
Sbjct: 676 RCWLQPEKGFIWGFLGPVCAIFSVNLVLFLVTLWILKNRLSSLNSEVSTLRNTRMLAFKA 735
Query: 103 IASQFILNCTYPHGLTR-GPAA 41
A FIL CT+ G+ + GPAA
Sbjct: 736 TAQLFILGCTWCLGILQVGPAA 757
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,047,104
Number of Sequences: 237096
Number of extensions: 989116
Number of successful extensions: 1433
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -