Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0490
         (522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97196-11|AAB52464.1|  273|Caenorhabditis elegans Hypothetical p...    29   1.5  
Z80220-6|CAB02305.1|  282|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine re...    27   8.1  

>U97196-11|AAB52464.1|  273|Caenorhabditis elegans Hypothetical
           protein B0207.11 protein.
          Length = 273

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = -3

Query: 196 RMNTIIIRECAIVLQFQISIKKQTSYNIKKNIASQFILNCTYPH 65
           R++TI   +  +++ ++ + KK   Y+I+     QF ++C YP+
Sbjct: 169 RLDTIT-EKLPLMIVYRTTTKKNRHYSIRTTCDQQFFVDCGYPN 211


>Z80220-6|CAB02305.1|  282|Caenorhabditis elegans Hypothetical
           protein T08G11.2 protein.
          Length = 282

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/44 (27%), Positives = 26/44 (59%)
 Frame = -3

Query: 196 RMNTIIIRECAIVLQFQISIKKQTSYNIKKNIASQFILNCTYPH 65
           R++TI  +   +++ ++ + KK   Y+I+     QF ++C YP+
Sbjct: 203 RLDTITDK-LPLMIVYRTTTKKNRHYSIRTTCDQQFFVDCGYPN 245


>AC006830-1|AAK68610.3|  802|Caenorhabditis elegans Hypothetical
           protein ZK105.3 protein.
          Length = 802

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = -3

Query: 148 QISIKKQTSYNIKKNIASQFILNCTYPHGLTRGPAASNYANYNFAGLVF 2
           Q+S K + SY +KKN+ +  I+   YP     G     Y  Y FA  +F
Sbjct: 479 QLSRKHENSYVLKKNLNTVLIVVNNYPWKYGMGLFQRLYEPY-FASTIF 526


>Z92784-7|CAE54895.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 453 IVGFFLYYNEFKF 491
           ++GFF YYNEF F
Sbjct: 715 LIGFFQYYNEFDF 727


>Z92784-6|CAB07197.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 453 IVGFFLYYNEFKF 491
           ++GFF YYNEF F
Sbjct: 712 LIGFFQYYNEFDF 724


>Z81526-9|CAE54892.1|  808|Caenorhabditis elegans Hypothetical
           protein F31C3.2b protein.
          Length = 808

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 453 IVGFFLYYNEFKF 491
           ++GFF YYNEF F
Sbjct: 715 LIGFFQYYNEFDF 727


>Z81526-8|CAB04268.1|  805|Caenorhabditis elegans Hypothetical
           protein F31C3.2a protein.
          Length = 805

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 453 IVGFFLYYNEFKF 491
           ++GFF YYNEF F
Sbjct: 712 LIGFFQYYNEFDF 724


>AF022980-5|AAG24192.1|  328|Caenorhabditis elegans Serpentine
           receptor, class j protein45 protein.
          Length = 328

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/51 (25%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -3

Query: 286 THRIWLLPIIYVQGSYCRLVTFFFQASICLR-MNTIIIRECAIVLQFQISI 137
           THR W+  I +   S   + +FF  A + +R +  + +R      +FQ  +
Sbjct: 193 THRAWIATISWSAVSIASITSFFVMARLIMRKLKKMTVRTSQKTSRFQFEL 243


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,862,617
Number of Sequences: 27780
Number of extensions: 182349
Number of successful extensions: 447
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)