Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0488
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   0.83 
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    25   1.1  
AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine pr...    25   1.9  
AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant r...    25   1.9  
AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding pr...    24   2.5  
AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding pr...    24   2.5  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   3.3  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             23   7.7  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.8 bits (54), Expect = 0.83
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 256 YHLVQLTHHLARRNIPTSHPANSNSADSGKTP 351
           +HL  L HH A++  P SHP         + P
Sbjct: 817 HHLHHLHHHAAQQPPPGSHPGAQTQPQLSQHP 848



 Score = 23.0 bits (47), Expect = 5.8
 Identities = 16/55 (29%), Positives = 21/55 (38%)
 Frame = +1

Query: 235 HHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGYKAPS 399
           HH   P    + LT   +    P+ HPA   S  S   P + T     GG   P+
Sbjct: 721 HHLTSPHGAPLALTSSKSASTHPSPHPATRASPSS---PIVATSSSGGGGSNTPN 772


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 11/30 (36%), Positives = 21/30 (70%), Gaps = 2/30 (6%)
 Frame = -2

Query: 288 GQVMCELNQVVLWYS--AVVLDMEDVPKLI 205
           G+V+ ++NQ+  W++  A  +D EDV +L+
Sbjct: 291 GKVVKDINQMTTWWNKIAKTMDEEDVRRLM 320


>AF393486-1|AAL60411.1|  162|Anopheles gambiae twelve cysteine
           protein 1 protein.
          Length = 162

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 322 SNSADSGKTPHLKTEKVTKGGYKAPSLLNDEMFVEAKKRIEDVD-IMGDPNST 477
           S+S D    PH K     +   K+  LLN +  VEAK + E +D + GD   T
Sbjct: 57  SSSVDETSEPHDKMMCTLECKLKSLGLLNGDHLVEAKVQ-EYIDRLEGDWKGT 108


>AF364131-1|AAL35507.1|  378|Anopheles gambiae putative odorant
           receptor Or2 protein.
          Length = 378

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 64  PPLKRY*HTRTIMESSVATHWLSAFVILCSFIT 162
           P L+RY  TR     S++  WL AF+  C F+T
Sbjct: 107 PVLERY--TRRGRMLSISNLWLGAFISAC-FVT 136


>AY330180-1|AAQ16286.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP54 protein.
          Length = 176

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 322 SNSADSGKTPHLKTEKVTKGGYKAPSLLNDEMFVEAKKRIEDVD-IMGDPNST 477
           S+S D    PH K     +   K+  LLN +  VEAK + E +D + GD   T
Sbjct: 57  SSSVDETSEPHDKMMCTLECKLKSLGLLNGDDLVEAKVQ-EYIDRLEGDWKGT 108


>AJ618924-1|CAF02003.1|  144|Anopheles gambiae odorant-binding
           protein OBP5470 protein.
          Length = 144

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
 Frame = +1

Query: 322 SNSADSGKTPHLKTEKVTKGGYKAPSLLNDEMFVEAKKRIEDVD-IMGDPNST 477
           S+S D    PH K     +   K+  LLN +  VEAK + E +D + GD   T
Sbjct: 20  SSSVDETSEPHDKMMCTLECKLKSLGLLNGDDLVEAKVQ-EYIDRLEGDWKGT 71


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 257 TTWFSSHITWPEGIYPLLTQRTRTAPI 337
           T  F +H+  P  +YP ++  + TAPI
Sbjct: 518 TAHFPTHLL-PSSLYPPVSSESTTAPI 543


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 442 EDVDIMGDPNSTVSVDFK 495
           E V+I G+PN T+S + K
Sbjct: 17  EKVNIKGNPNGTISYNQK 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,109
Number of Sequences: 2352
Number of extensions: 12169
Number of successful extensions: 25
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)