Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0488
(502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB209289-1|BAD92526.1| 369|Homo sapiens beta isoform of regulat... 35 0.18
D87444-1|BAA13385.2| 692|Homo sapiens KIAA0255 protein. 29 6.9
BC022850-1|AAH22850.1| 625|Homo sapiens transmembrane 9 superfa... 29 6.9
BC021107-1|AAH21107.1| 625|Homo sapiens transmembrane 9 superfa... 29 6.9
AL049539-3|CAB75607.2| 625|Homo sapiens transmembrane 9 superfa... 29 6.9
AL022319-1|CAI19662.1| 2016|Homo sapiens calcium channel, voltag... 29 6.9
AL022312-6|CAI19180.1| 2016|Homo sapiens calcium channel, voltag... 29 6.9
AL008716-1|CAI17903.1| 2016|Homo sapiens calcium channel, voltag... 29 6.9
AK126534-1|BAC86581.1| 528|Homo sapiens protein ( Homo sapiens ... 29 6.9
AF393329-1|AAM67414.1| 2188|Homo sapiens voltage-dependent calci... 29 6.9
AF211189-1|AAF44626.1| 1981|Homo sapiens T-type calcium channel ... 29 6.9
AF142567-1|AAF25722.1| 2223|Homo sapiens T calcium channel alpha... 29 6.9
AF129133-1|AAD45251.1| 2016|Homo sapiens T-type calcium channel ... 29 6.9
AB032946-1|BAA86434.1| 1024|Homo sapiens KIAA1120 protein protein. 29 6.9
>AB209289-1|BAD92526.1| 369|Homo sapiens beta isoform of regulatory
subunit B56, protein phosphatase 2A variant protein.
Length = 369
Score = 34.7 bits (76), Expect = 0.18
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 186 PRAHDNR*ASERLPCRAPQQSTRVPPGSAHTS 281
PR +N SE LPCR T++PP S TS
Sbjct: 9 PRPRENPRGSESLPCRLTAMETKLPPASTPTS 40
>D87444-1|BAA13385.2| 692|Homo sapiens KIAA0255 protein.
Length = 692
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 260 WYSGTLLWCSTWKTFRSSSIVMCSWILLLSDCVVM 156
W + W S W T+ + S V W +++ VV+
Sbjct: 306 WEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVV 340
>BC022850-1|AAH22850.1| 625|Homo sapiens transmembrane 9
superfamily protein member 4 protein.
Length = 625
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 260 WYSGTLLWCSTWKTFRSSSIVMCSWILLLSDCVVM 156
W + W S W T+ + S V W +++ VV+
Sbjct: 239 WEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVV 273
>BC021107-1|AAH21107.1| 625|Homo sapiens transmembrane 9
superfamily protein member 4 protein.
Length = 625
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 260 WYSGTLLWCSTWKTFRSSSIVMCSWILLLSDCVVM 156
W + W S W T+ + S V W +++ VV+
Sbjct: 239 WEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVV 273
>AL049539-3|CAB75607.2| 625|Homo sapiens transmembrane 9
superfamily protein member 4 protein.
Length = 625
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 260 WYSGTLLWCSTWKTFRSSSIVMCSWILLLSDCVVM 156
W + W S W T+ + S V W +++ VV+
Sbjct: 239 WEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVV 273
>AL022319-1|CAI19662.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 64 PPLKRY*HTRTIMESSVATHWLSAFV--ILCSFITTQSLNN 180
P Y HTR ++ S +H+L F+ I+C + T SL +
Sbjct: 1468 PYYATYCHTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEH 1508
>AL022312-6|CAI19180.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 64 PPLKRY*HTRTIMESSVATHWLSAFV--ILCSFITTQSLNN 180
P Y HTR ++ S +H+L F+ I+C + T SL +
Sbjct: 1468 PYYATYCHTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEH 1508
>AL008716-1|CAI17903.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 64 PPLKRY*HTRTIMESSVATHWLSAFV--ILCSFITTQSLNN 180
P Y HTR ++ S +H+L F+ I+C + T SL +
Sbjct: 1468 PYYATYCHTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEH 1508
>AK126534-1|BAC86581.1| 528|Homo sapiens protein ( Homo sapiens
cDNA FLJ44570 fis, clone UTERU3011063, highly similar
to Transmembrane 9 superfamily protein member 4. ).
Length = 528
Score = 29.5 bits (63), Expect = 6.9
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = -3
Query: 260 WYSGTLLWCSTWKTFRSSSIVMCSWILLLSDCVVM 156
W + W S W T+ + S V W +++ VV+
Sbjct: 142 WEESDIKWASRWDTYLTMSDVQIHWFSIINSVVVV 176
>AF393329-1|AAM67414.1| 2188|Homo sapiens voltage-dependent calcium
channel T-type alpha 1I subunit protein.
Length = 2188
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 64 PPLKRY*HTRTIMESSVATHWLSAFV--ILCSFITTQSLNN 180
P Y HTR ++ S +H+L F+ I+C + T SL +
Sbjct: 1433 PYYATYCHTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEH 1473
>AF211189-1|AAF44626.1| 1981|Homo sapiens T-type calcium channel
alpha1 subunit Alpha1I-a isoform protein.
Length = 1981
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 64 PPLKRY*HTRTIMESSVATHWLSAFV--ILCSFITTQSLNN 180
P Y HTR ++ S +H+L F+ I+C + T SL +
Sbjct: 1433 PYYATYCHTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEH 1473
>AF142567-1|AAF25722.1| 2223|Homo sapiens T calcium channel alpha1I
subunit, delta36B splice variant protein.
Length = 2223
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 64 PPLKRY*HTRTIMESSVATHWLSAFV--ILCSFITTQSLNN 180
P Y HTR ++ S +H+L F+ I+C + T SL +
Sbjct: 1468 PYYATYCHTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEH 1508
>AF129133-1|AAD45251.1| 2016|Homo sapiens T-type calcium channel
alpha1I subunit protein.
Length = 2016
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 64 PPLKRY*HTRTIMESSVATHWLSAFV--ILCSFITTQSLNN 180
P Y HTR ++ S +H+L F+ I+C + T SL +
Sbjct: 1468 PYYATYCHTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEH 1508
>AB032946-1|BAA86434.1| 1024|Homo sapiens KIAA1120 protein protein.
Length = 1024
Score = 29.5 bits (63), Expect = 6.9
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +1
Query: 64 PPLKRY*HTRTIMESSVATHWLSAFV--ILCSFITTQSLNN 180
P Y HTR ++ S +H+L F+ I+C + T SL +
Sbjct: 269 PYYATYCHTRLLIHSMCTSHYLDIFITFIICLNVVTMSLEH 309
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,827,945
Number of Sequences: 237096
Number of extensions: 1845046
Number of successful extensions: 5428
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5428
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -