Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0488
(502 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3683|AAF47059.2| 639|Drosophila melanogaster CG9850-PA... 52 4e-07
BT016057-1|AAV36942.1| 961|Drosophila melanogaster LP14942p pro... 29 3.5
AE014296-3038|AAG22572.1| 961|Drosophila melanogaster CG18811-P... 29 3.5
DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 4.7
DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 4.7
DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 4.7
DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 4.7
DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 4.7
DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 4.7
DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 4.7
DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1 prot... 29 4.7
AY118984-1|AAM50844.1| 353|Drosophila melanogaster LP02089p pro... 29 4.7
AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA... 29 4.7
AE014296-2286|AAF49811.1| 1172|Drosophila melanogaster CG10738-P... 29 4.7
AE014296-2285|AAN11824.1| 1272|Drosophila melanogaster CG10738-P... 29 4.7
AE014296-38|AAF47348.1| 287|Drosophila melanogaster CG13876-PA ... 29 4.7
AE014134-1497|AAF52669.1| 353|Drosophila melanogaster CG13385-P... 29 4.7
AF371282-1|AAK54736.1| 598|Drosophila melanogaster voltage-depe... 28 8.2
AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB... 28 8.2
AE014134-1644|AAF52780.1| 328|Drosophila melanogaster CG31883-P... 28 8.2
>AE013599-3683|AAF47059.2| 639|Drosophila melanogaster CG9850-PA,
isoform A protein.
Length = 639
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/83 (32%), Positives = 42/83 (50%)
Frame = +1
Query: 139 VILCSFITTQSLNNKIHEHMTIDELRNVFHVEHHSRVPEYHLVQLTHHLARRNIPTSHPA 318
++L S Q L + +H+ MT ++L++VFHV+ H VP Y LVQL HH N
Sbjct: 11 LLLVSSTICQGLPD-LHKQMTPEQLQSVFHVDTHDAVPHYELVQLQHHENNHNRRRRSIG 69
Query: 319 NSNSADSGKTPHLKTEKVTKGGY 387
++ PH + ++K Y
Sbjct: 70 KGPKVNAALPPHHVKKDLSKNAY 92
>BT016057-1|AAV36942.1| 961|Drosophila melanogaster LP14942p
protein.
Length = 961
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 174 QQQDPRAHDNR*ASERLPCRAPQQSTRVPPGSAHTSLGQKEYTHFSPS--ELEQRRFRKD 347
Q Q P H ++ S + +A Q T PP Q THF+P+ +EQ F++
Sbjct: 441 QPQQPPPHPHQLLSSPVNLQALQTGTAAPPAQQQ----QPHPTHFAPNVRAVEQNYFKQP 496
Query: 348 P 350
P
Sbjct: 497 P 497
>AE014296-3038|AAG22572.1| 961|Drosophila melanogaster CG18811-PA
protein.
Length = 961
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +3
Query: 174 QQQDPRAHDNR*ASERLPCRAPQQSTRVPPGSAHTSLGQKEYTHFSPS--ELEQRRFRKD 347
Q Q P H ++ S + +A Q T PP Q THF+P+ +EQ F++
Sbjct: 441 QPQQPPPHPHQLLSSPVNLQALQTGTAAPPAQQQ----QPHPTHFAPNVRAVEQNYFKQP 496
Query: 348 P 350
P
Sbjct: 497 P 497
>DQ398892-1|ABD61608.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 KLIYCHVLVDLVVERLCRDE*AEY-HERREPVRRHGRLHDCPRVLI 79
K + C D V + + AE H R+E V + R+HDC VLI
Sbjct: 466 KFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDC-NVLI 510
>DQ398891-1|ABD61607.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 KLIYCHVLVDLVVERLCRDE*AEY-HERREPVRRHGRLHDCPRVLI 79
K + C D V + + AE H R+E V + R+HDC VLI
Sbjct: 466 KFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDC-NVLI 510
>DQ398890-1|ABD61606.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 KLIYCHVLVDLVVERLCRDE*AEY-HERREPVRRHGRLHDCPRVLI 79
K + C D V + + AE H R+E V + R+HDC VLI
Sbjct: 466 KFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDC-NVLI 510
>DQ398889-1|ABD61605.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 KLIYCHVLVDLVVERLCRDE*AEY-HERREPVRRHGRLHDCPRVLI 79
K + C D V + + AE H R+E V + R+HDC VLI
Sbjct: 466 KFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDC-NVLI 510
>DQ398888-1|ABD61604.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 KLIYCHVLVDLVVERLCRDE*AEY-HERREPVRRHGRLHDCPRVLI 79
K + C D V + + AE H R+E V + R+HDC VLI
Sbjct: 466 KFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDC-NVLI 510
>DQ398887-1|ABD61603.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 KLIYCHVLVDLVVERLCRDE*AEY-HERREPVRRHGRLHDCPRVLI 79
K + C D V + + AE H R+E V + R+HDC VLI
Sbjct: 466 KFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDC-NVLI 510
>DQ398886-1|ABD61602.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 KLIYCHVLVDLVVERLCRDE*AEY-HERREPVRRHGRLHDCPRVLI 79
K + C D V + + AE H R+E V + R+HDC VLI
Sbjct: 466 KFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDC-NVLI 510
>DQ398885-1|ABD61601.1| 2043|Drosophila melanogaster Dicer-1
protein.
Length = 2043
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 KLIYCHVLVDLVVERLCRDE*AEY-HERREPVRRHGRLHDCPRVLI 79
K + C D V + + AE H R+E V + R+HDC VLI
Sbjct: 466 KFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDC-NVLI 510
>AY118984-1|AAM50844.1| 353|Drosophila melanogaster LP02089p
protein.
Length = 353
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 266 FSSHITWPEGIYPLLTQRTRTAPIQERPPI*KPKKSLKVGTRPPLCSMTRCLSKQ 430
FS I P +Y +L R PI PP ++ ++ T P C + L+ +
Sbjct: 98 FSRSINQPPPVYYVLRPEDRIMPIYIPPPRFNNEQGSRMATECPCCGHAKSLNPE 152
>AE014297-3226|AAF56056.1| 2249|Drosophila melanogaster CG4792-PA
protein.
Length = 2249
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 213 KLIYCHVLVDLVVERLCRDE*AEY-HERREPVRRHGRLHDCPRVLI 79
K + C D V + + AE H R+E V + R+HDC VLI
Sbjct: 523 KFLRCQYTTDRVADPTTEPKEAELEHRRQEEVLKRFRMHDC-NVLI 567
>AE014296-2286|AAF49811.1| 1172|Drosophila melanogaster CG10738-PA,
isoform A protein.
Length = 1172
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 36 CLILRQCTRSAFKTILTHED--NHGVFRGDALALCVRDTLLIHHDTI 170
C+I CTR + K IL +ED +F +A +R + +H I
Sbjct: 632 CIISEYCTRGSLKDILENEDVKLDNMFIASMVADIIRGVIYLHDSPI 678
>AE014296-2285|AAN11824.1| 1272|Drosophila melanogaster CG10738-PB,
isoform B protein.
Length = 1272
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 36 CLILRQCTRSAFKTILTHED--NHGVFRGDALALCVRDTLLIHHDTI 170
C+I CTR + K IL +ED +F +A +R + +H I
Sbjct: 669 CIISEYCTRGSLKDILENEDVKLDNMFIASMVADIIRGVIYLHDSPI 715
>AE014296-38|AAF47348.1| 287|Drosophila melanogaster CG13876-PA
protein.
Length = 287
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 262 GGTLVLCCGARHGRRSEAHLLSCARG 185
G LV+CCG H R S + CA G
Sbjct: 210 GHFLVICCGTLHSRDSCVGIFECAFG 235
>AE014134-1497|AAF52669.1| 353|Drosophila melanogaster CG13385-PA
protein.
Length = 353
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +2
Query: 266 FSSHITWPEGIYPLLTQRTRTAPIQERPPI*KPKKSLKVGTRPPLCSMTRCLSKQ 430
FS I P +Y +L R PI PP ++ ++ T P C + L+ +
Sbjct: 98 FSRSINQPPPVYYVLRPEDRIMPIYIPPPRFNNEQGSRMATECPCCGHAKSLNPE 152
>AF371282-1|AAK54736.1| 598|Drosophila melanogaster
voltage-dependent calcium channelalpha13 subunit
protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 226 HVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGY 387
H +H R E+H Q +HH N TSH N S ++ + G Y
Sbjct: 471 HAANHRR-KEHH--QQSHHHHNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNY 521
>AE014298-846|AAF46127.2| 2893|Drosophila melanogaster CG15899-PB
protein.
Length = 2893
Score = 27.9 bits (59), Expect = 8.2
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +1
Query: 226 HVEHHSRVPEYHLVQLTHHLARRNIPTSHPANSNSADSGKTPHLKTEKVTKGGY 387
H +H R E+H Q +HH N TSH N S ++ + G Y
Sbjct: 829 HAANHRR-KEHH--QQSHHHHNNNNTTSHSRNYRSRQGQGNSRMREPRAPTGNY 879
>AE014134-1644|AAF52780.1| 328|Drosophila melanogaster CG31883-PA
protein.
Length = 328
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +1
Query: 295 NIPTSHPANSNSADSGKTPHLKTEKVTKGGYKA-PSLLNDEMFVEAKKRIEDVDIMGDPN 471
+IP P +S+ SG +P K + +KG + P+ + + VE+ K +V G P
Sbjct: 166 DIPQQKPEDSSGGGSGGSPQNKPVESSKGNPEVKPAGIPENKPVESSKGNPEVKPAGIPE 225
Query: 472 S 474
S
Sbjct: 226 S 226
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,811,809
Number of Sequences: 53049
Number of extensions: 571686
Number of successful extensions: 1916
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1784022528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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