Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0487
(714 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ... 86 7e-16
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ... 47 5e-04
UniRef50_Q88WJ7 Cluster: UPF0122 protein lp_1634; n=43; Bacilli|... 38 0.19
UniRef50_Q2JU59 Cluster: ISSoc4, transposase orfAB; n=18; Synech... 35 1.7
UniRef50_A5ZEP0 Cluster: Putative uncharacterized protein; n=2; ... 34 4.0
UniRef50_A5C4N1 Cluster: Putative uncharacterized protein; n=1; ... 34 4.0
UniRef50_Q46633 Cluster: Amylovoran biosynthesis protein amsC; n... 34 4.0
UniRef50_A4AVP7 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q877K7 Cluster: ISPsy8, transposase OrfA; n=2; Pseudomo... 33 7.0
UniRef50_O05290 Cluster: Probable UPF0122 protein; n=3; Mycoplas... 33 7.0
UniRef50_Q0AUU0 Cluster: Transposase; n=1; Syntrophomonas wolfei... 33 9.2
UniRef50_A0AGR8 Cluster: Complete genome; n=1; Listeria welshime... 33 9.2
>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
Bombyx mori|Rep: Putative uncharacterized protein -
Bombyx mori (Silk moth)
Length = 77
Score = 86.2 bits (204), Expect = 7e-16
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = +1
Query: 73 FI*LLADLADFVMPQSINKRPKLLYKINLKQTKGICLMGGTHQRV*QNCYFYLIPSIFIY 252
F+ +LAD ADFV+PQSINKRPK LYKINLKQTKGI G T + QNCYFYLIP IFI+
Sbjct: 18 FMIILADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEK-QNCYFYLIPRIFIF 76
>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
Bombyx mori|Rep: Putative uncharacterized protein -
Bombyx mori (Silk moth)
Length = 47
Score = 46.8 bits (106), Expect = 5e-04
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -2
Query: 332 LKLGNGWTDLANFGLELFVEVQRRFK 255
LKL NGWTDLANFGLEL VEVQR K
Sbjct: 20 LKLENGWTDLANFGLELPVEVQRGLK 45
>UniRef50_Q88WJ7 Cluster: UPF0122 protein lp_1634; n=43;
Bacilli|Rep: UPF0122 protein lp_1634 - Lactobacillus
plantarum
Length = 115
Score = 38.3 bits (85), Expect = 0.19
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Frame = +1
Query: 478 YKRYDPLIL---KTAIEAYEIGNRSLVEIAKQFNISKSVLHRHVTRTMKSQGGHKKRLH 645
++ Y+PL+ K I+ Y + SL EIA +F++S+ ++ ++ RT K G++ +LH
Sbjct: 13 FEFYEPLLTNKQKAYIQLYYADDYSLGEIAAEFSVSRQAVYDNIKRTEKILEGYEAKLH 71
>UniRef50_Q2JU59 Cluster: ISSoc4, transposase orfAB; n=18;
Synechococcus|Rep: ISSoc4, transposase orfAB -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 315
Score = 35.1 bits (77), Expect = 1.7
Identities = 15/46 (32%), Positives = 28/46 (60%)
Frame = +1
Query: 514 IEAYEIGNRSLVEIAKQFNISKSVLHRHVTRTMKSQGGHKKRLHNK 651
+ AY+ GN S+ ++AK+F ++K +HR V + ++Q K+ K
Sbjct: 13 VAAYQAGNTSIRQVAKRFMVTKRTVHRWVRQYQQTQDLAPKKAGTK 58
>UniRef50_A5ZEP0 Cluster: Putative uncharacterized protein; n=2;
Bacteroides|Rep: Putative uncharacterized protein -
Bacteroides caccae ATCC 43185
Length = 169
Score = 33.9 bits (74), Expect = 4.0
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = +1
Query: 439 DMPSVCVSKSAKPYKRYDPLILKTAIEAYEIGNRSLVEIAKQFNISKSVLHRHVTRTMK 615
D +C+ K+ K Y+ IL EA I N+ E+A++ N+S + +H+++ + ++
Sbjct: 100 DSRILCIRKAMKKLTPYNYYIL----EACYIHNKKYKEVAEELNVSVAAIHKNIVKALR 154
>UniRef50_A5C4N1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 400
Score = 33.9 bits (74), Expect = 4.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 349 IHFYIYRLMQCYFIAWQIFILSVTYYFLILDMPSVCVSKSAKPYKR 486
+H + R +CY I W+ I++VT +++LD P+ K K R
Sbjct: 180 VHVHPKRFPRCYEIDWKSRIIAVTESYVVLDKPAGTSEKKVKKLYR 225
>UniRef50_Q46633 Cluster: Amylovoran biosynthesis protein amsC; n=2;
Erwinia|Rep: Amylovoran biosynthesis protein amsC -
Erwinia amylovora (Fire blight bacteria)
Length = 375
Score = 33.9 bits (74), Expect = 4.0
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +1
Query: 361 IYRLMQCYFI-AWQIFILSVTYYFLILDMPSVCVSKSAKPYKRYDPLIL 504
IYR + + AW + YF +L + + VS +A YK+Y PLIL
Sbjct: 85 IYRYENFFMVLAWVASCFTHESYFFLLFISFIAVSTNAWVYKKYSPLIL 133
>UniRef50_A4AVP7 Cluster: Putative uncharacterized protein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
uncharacterized protein - Flavobacteriales bacterium
HTCC2170
Length = 570
Score = 33.5 bits (73), Expect = 5.3
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 150 NKLKTNKRNLFDGGDTSKGVTKLLFLFNSEHFYLPFKPSL 269
NK K+NKRN+F + L FN+++ Y+P P++
Sbjct: 253 NKSKSNKRNIFKVALILPALAVFLLSFNTKNVYIPMDPAI 292
>UniRef50_Q877K7 Cluster: ISPsy8, transposase OrfA; n=2; Pseudomonas
syringae group|Rep: ISPsy8, transposase OrfA -
Pseudomonas syringae pv. tomato
Length = 171
Score = 33.1 bits (72), Expect = 7.0
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +1
Query: 484 RYDPLILKTAIEAYEIGNRSLVEIAKQFNISKSVLHRHVTRTMKSQG--GHKK 636
+Y T ++AY GN +++ QF+I S+L R V KS G GH+K
Sbjct: 3 KYSEQFKLTVVKAYLAGNIGFRKVSSQFSIDSSLLRRWVA-NYKSHGHTGHRK 54
>UniRef50_O05290 Cluster: Probable UPF0122 protein; n=3;
Mycoplasma|Rep: Probable UPF0122 protein - Mycoplasma
mycoides
Length = 113
Score = 33.1 bits (72), Expect = 7.0
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +1
Query: 457 VSKSAKPYKRYDPLILKTAIEAYEIGNRSLVEIAKQFNISKSVLHRHVTRTMKSQGGHKK 636
+S+ K YK K E Y + SL EIA +FNISK+ ++ +++T K +
Sbjct: 14 LSELFKIYKELLTDKQKQYFELYIDEDLSLSEIADEFNISKTAVYDSISKTSKLLFSLET 73
Query: 637 RLHNK 651
+LH K
Sbjct: 74 KLHLK 78
>UniRef50_Q0AUU0 Cluster: Transposase; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep: Transposase -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 92
Score = 32.7 bits (71), Expect = 9.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 481 KRYDPLILKTAIEAYEIGNRSLVEIAKQFNISKSVLHRHVTRTMKSQGGH 630
K Y+ K ++ Y GN S E+++Q++I+ S + + V R +Q H
Sbjct: 4 KHYEENFKKQIVKIYNQGNHSYRELSEQYDIAPSTVRQWVMRYNNTQSFH 53
>UniRef50_A0AGR8 Cluster: Complete genome; n=1; Listeria welshimeri
serovar 6b str. SLCC5334|Rep: Complete genome - Listeria
welshimeri serovar 6b (strain ATCC 35897 / DSM 20650
/SLCC5334)
Length = 188
Score = 32.7 bits (71), Expect = 9.2
Identities = 14/46 (30%), Positives = 27/46 (58%)
Frame = +1
Query: 463 KSAKPYKRYDPLILKTAIEAYEIGNRSLVEIAKQFNISKSVLHRHV 600
K +P K+ D +K + Y NR++ +IAK N+S+ +++H+
Sbjct: 136 KLGRPQKQID---IKKIVTLYTTDNRTVTDIAKLMNLSRPTIYKHL 178
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 658,479,523
Number of Sequences: 1657284
Number of extensions: 12478631
Number of successful extensions: 23608
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23603
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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