Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0487
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.087
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    27   0.11 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    27   0.11 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    27   0.20 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   3.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   5.7  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    22   5.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 27.9 bits (59), Expect = 0.087
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 352 HFYIYRLMQCYFIAWQIFILSVTYYFLILDMPSVCV 459
           +F ++ L  C FI + +  L  TYYF    +  +CV
Sbjct: 78  YFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCV 113


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 355 FYIYRLMQCYFIAWQIFILSVTYY 426
           F +YRL++C+ I+  I++ +  YY
Sbjct: 216 FLLYRLLRCWLISKCIYVFNPRYY 239


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 27.5 bits (58), Expect = 0.11
 Identities = 9/24 (37%), Positives = 17/24 (70%)
 Frame = +1

Query: 355 FYIYRLMQCYFIAWQIFILSVTYY 426
           F +YRL++C+ I+  I++ +  YY
Sbjct: 216 FLLYRLLRCWLISKCIYVFNPRYY 239


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 11/47 (23%), Positives = 24/47 (51%)
 Frame = +1

Query: 463 KSAKPYKRYDPLILKTAIEAYEIGNRSLVEIAKQFNISKSVLHRHVT 603
           +  KPY   DP +    ++A ++    L+E+ K   +  +  HR+++
Sbjct: 131 RQEKPYYIADPEVDSLMVQAIQVLRFHLLELEKVHELCDNFCHRYIS 177


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 649 YYVIFFCVHLEISLFLLHVCAKQT 578
           YY  FF VHL   + +++    QT
Sbjct: 116 YYYAFFGVHLAYGVVIIYSICVQT 139


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +3

Query: 579 VCFAQTCNKNNEISRW 626
           +C  +  + NNE+ RW
Sbjct: 25  ICVPKITSTNNEVPRW 40


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 192 DTSKGVTKLLFLFNSEHFYLPFKPSLDFH 278
           +TS  V+K  F+   +H Y P + S   H
Sbjct: 16  NTSTPVSKSAFIELQQHGYGPLRTSYQHH 44


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,291
Number of Sequences: 336
Number of extensions: 3685
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)