Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0485
(704 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 36 0.032
SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9) 34 0.13
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 33 0.23
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 33 0.30
SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17) 28 6.4
SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17) 28 8.5
SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47) 28 8.5
SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1) 28 8.5
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 39.5 bits (88), Expect = 0.003
Identities = 30/109 (27%), Positives = 49/109 (44%)
Frame = +2
Query: 359 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 538
+L L SY YL A +F+ GF K F K S + E L+K +RGG++
Sbjct: 208 NLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQNERGGRIVLQD 267
Query: 539 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSD 685
+ D E G + ++ ALD +K + + + +H+ K+ D
Sbjct: 268 IKKPEKD-------EWGCGMDSIQVALDLEKHVNQALLDLHKIAEKHGD 309
Score = 31.9 bits (69), Expect = 0.52
Identities = 21/96 (21%), Positives = 45/96 (46%)
Frame = +2
Query: 398 ASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYT 577
A++F + GFA F+K +++ + ++ + KRGG++ H +K +
Sbjct: 1 AAHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRGGRVKL--HHIMKPCRD---- 54
Query: 578 VEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSD 685
G+ + A+ AL +K++ + +H+ N D
Sbjct: 55 -HWGNGLMAMRDALYLEKEINHALLDLHQVADTNRD 89
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 37.1 bits (82), Expect = 0.014
Identities = 29/109 (26%), Positives = 49/109 (44%)
Frame = +2
Query: 359 SLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSS 538
+L L SY Y+ A +F+ GF K F K S + E L K +RGG++
Sbjct: 140 NLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRGGRIVLQD 199
Query: 539 HTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTKNSD 685
+K + ++ G A+ ALD +K + + + +H+ K+ D
Sbjct: 200 ---IKRPERDDW----GCGQDAIQAALDLEKHVNQALLDLHKVAEKHGD 241
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +2
Query: 167 IASNMKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 328
++S+MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 46 MSSDMKSLVLLIACFSVARATEDDFCKER-DAGC--YVDLKDCSKYY-QCDDFH 95
>SB_19839| Best HMM Match : Ery_res_leader2 (HMM E-Value=9.9)
Length = 117
Score = 33.9 bits (74), Expect = 0.13
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 187 VCSHRCLSGSGCAGRGRLMLSERRPRMQTDFKSAALQRVLR 309
V SH LSG GC G+GR + E++ R +A LQ +LR
Sbjct: 56 VWSHLHLSGGGC-GKGRHLPKEKQSRGSPPISAALLQHILR 95
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +2
Query: 179 MKVYALIVACLALGVLAEEDSCYQNVDQGCRRTLSLPHCSAYYGQFKDNH 328
MK L++AC ++ E+D C + D GC + L CS YY Q D H
Sbjct: 1 MKSLVLLIACFSVARATEDDYCKER-DAGC--YVDLKDCSKYY-QCDDFH 46
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 380 YHYLLSASYFNNYQTNREGFAKLFRKLSDDSWE 478
Y YL A +F+ N GF K F+K S + WE
Sbjct: 50 YTYLSMAFHFDRDDINLPGFNKFFKKASKEEWE 82
>SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)
Length = 237
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 464 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGD 559
+DS ++ +G +K V K GG+ F H K D
Sbjct: 160 EDSLDQLLGEVKRVLKPGGRFYFIEHIADKSD 191
>SB_18191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1008
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 356 ASLYLKRSYHYLLSASYFNNYQTNREGFAKLFRKLSDD 469
+++ L HYL S + F NYQ +G LF++ D+
Sbjct: 326 STILLNAGLHYLESTN-FTNYQRLIDGIVLLFKRAKDE 362
>SB_10903| Best HMM Match : Aldolase_II (HMM E-Value=9.1e-17)
Length = 280
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 178 YEGVCSHRCLSGSGCAGRGRLML 246
+EGVC+H + G G GR+ML
Sbjct: 63 HEGVCNHLSMMAPGKHGTGRVML 85
>SB_39606| Best HMM Match : DUF164 (HMM E-Value=0.47)
Length = 626
Score = 27.9 bits (59), Expect = 8.5
Identities = 21/82 (25%), Positives = 34/82 (41%)
Frame = +1
Query: 280 KSAALQRVLRPIQGQPRCSERTEGISLTVFETFLPLSPVGLLLQQLPDEQGRIREALQEI 459
+S + R PI G+ R G + + PLSP ++ D R R LQ +
Sbjct: 119 RSKSPVRSTSPILGRSSSPSRRGGSPSRILNSS-PLSPSKQVVDGDNDTVQRQRRELQLL 177
Query: 460 IGRFVGENHWSHKARH*EGWED 525
IG + +SH + W++
Sbjct: 178 IGELKDRDRFSHWKKDVRDWKE 199
>SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)
Length = 245
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = -1
Query: 155 RILEKITSAFDVCRKYCLYTHWRRRRLPTMTRLDANVRTKTTDCN 21
R L+ + SA VC +YCLY W R R ++ + + T TD N
Sbjct: 100 RQLQALDSA--VCGQYCLYFLWHRARNKSLQDI-TTMFTPHTDWN 141
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,097,959
Number of Sequences: 59808
Number of extensions: 425393
Number of successful extensions: 1140
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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