Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0484
(549 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 36 0.003
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 35 0.007
SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces pombe... 34 0.016
SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo... 32 0.048
SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|... 31 0.085
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 31 0.085
SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces po... 31 0.11
SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein 2|S... 31 0.11
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 31 0.15
SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr 1|... 30 0.26
SPAC17C9.05c |pmc3|prk1, med27|mediator complex subunit Pmc3 |Sc... 28 0.79
SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein k... 28 1.0
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 1.0
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 1.4
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 1.4
SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|ch... 27 1.8
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 27 1.8
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 27 1.8
SPBC56F2.11 |met6||homoserine O-acetyltransferase|Schizosaccharo... 27 1.8
SPCC74.02c |||mRNA cleavage and polyadenylation specificity fact... 27 1.8
SPAC22E12.01 ||SPAC890.09|triose phosphate transporter |Schizosa... 27 1.8
SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyce... 27 1.8
SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 27 2.4
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 27 2.4
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 27 2.4
SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces... 27 2.4
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 27 2.4
SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces po... 27 2.4
SPAC4F10.09c |||ribosome biogenesis protein Noc1 |Schizosaccharo... 26 3.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 3.2
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 26 4.2
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 26 4.2
SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 25 5.6
SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr 1|... 25 5.6
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 25 5.6
SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3 |Schizosacchar... 25 5.6
SPBP35G2.09 |usp103|yhc1|U1 snRNP-associated protein Usp103 |Sch... 25 5.6
SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|c... 25 5.6
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 25 7.3
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 25 9.7
SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces po... 25 9.7
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 25 9.7
SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein 4|Schizosacc... 25 9.7
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 25 9.7
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 36.3 bits (80), Expect = 0.003
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Frame = +1
Query: 157 VNQEPF--GETIPTIEPEPIDNEETTEQPSSINHASKDIVLTSEAELANQERSREQPNFS 330
+NQE GE + E NEE E I + +L E N+E + N
Sbjct: 452 INQEETTSGEAVTKSTVESSANEEEAEPNEIIEENAVKSLLNQEGPATNEEVEKNNANSE 511
Query: 331 IDQKNTTE--LESPINQTETTE-----PQFSVSKQPSGEISAIPE--SVSSVNQEHTTEP 483
T E +E+P++ E ++ P + +G I IP+ V + HTT
Sbjct: 512 NANGLTDEKIIEAPLDTKENSDDDKPSPAAAEDIGTNGAIEEIPQVSEVLEPEKAHTTNL 571
Query: 484 Q-SSMDQEPSNEISATTKSQSS 546
Q +++D+E +++ TT QSS
Sbjct: 572 QLNALDKE--EDLNITTVKQSS 591
Score = 29.5 bits (63), Expect = 0.34
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Frame = +1
Query: 154 SVNQEPFGETIPTIEPEPIDNEETT---EQPSSI---NHASKDIVLTSEAEL-ANQERSR 312
S QE E + + E N E+T +Q S + NH K L + ++ N+E +
Sbjct: 372 STKQENPEEDMQIKDAEEHSNLESTPAAQQTSEVEANNHQEKPSSLPAVEQINVNEENNT 431
Query: 313 EQPNFSIDQK--NTTELESPINQTETTEPQFSVSKQPSGEISAIPESV--SSVNQEHTTE 480
+ D+K N T ES INQ ETT + +V+K + E SA E + + +E+ +
Sbjct: 432 PETEGLEDEKEENNTAAESLINQEETTSGE-AVTKS-TVESSANEEEAEPNEIIEENAVK 489
Query: 481 PQSSMDQEPSNE 516
+ + +NE
Sbjct: 490 SLLNQEGPATNE 501
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 35.1 bits (77), Expect = 0.007
Identities = 23/114 (20%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Frame = +1
Query: 178 ETIPTIEPEPIDNEETT-EQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNTTE 354
+ P I+ ID++E++ ++ +++ S I + S + PN ++ TT
Sbjct: 948 DEFPPIQFNEIDDDESSSDEEPPMSNLSPQISIGSVTNYTSAVTELPDPNHQLEMSTTTH 1007
Query: 355 LESPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNE 516
++ P ++T + + SG A + +VN ++P D + +NE
Sbjct: 1008 VQHPNSETIPSSTENQYFDTTSGAFEANSNTEVTVNSNEVSQP---FDFDTANE 1058
>SPACUNK4.14 |mdb1||BRCT domain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 520
Score = 33.9 bits (74), Expect = 0.016
Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 8/141 (5%)
Frame = +1
Query: 151 LSVNQEPFGETIPTIEP--EPI---DNEETTEQPSSI---NHASKDIVLTSEAELANQER 306
L + +E F E IP + EP+ +N E + H D +E E+ ++++
Sbjct: 64 LELEKELFSERIPESQSAAEPVLKVENSENDLDEKLVLDGQHVEGDHSSDTEEEVVSEDQ 123
Query: 307 SREQPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQ 486
+Q N + D+ E Q ET P SVS+ SG+ S P V Q
Sbjct: 124 --KQLNKTDDESTFIESHQIYIQGETKSPS-SVSQSLSGDPSLKPAEVFDRKQSAEINSP 180
Query: 487 SSMDQEPSNEISATTKSQSSI 549
D P IS ++ +SI
Sbjct: 181 IEKDVNPQQNISDSSIKNNSI 201
>SPCC1682.03c |mug174||meiotically upregulated gene
Mug174|Schizosaccharomyces pombe|chr 3|||Manual
Length = 626
Score = 32.3 bits (70), Expect = 0.048
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Frame = +1
Query: 154 SVNQEPFGETIPTIEPE---PIDNEETTEQPSSINHASKDIVLTSEAELANQ--ERSREQ 318
S+ Q+P ++ T + + P +++ ++ + SS S D+ TS++ ++ + +R+
Sbjct: 242 SIVQQPELNSLLTSQSKNSTPSESDSSSSESSSSVSDSSDLSSTSDSSSGDESSDTARQS 301
Query: 319 PNFSIDQKNTTELESPINQTETTEPQ--FSVSKQP-SGEI---SAIPESVSSVNQEHTTE 480
+ +I N + S E + PQ F + E+ S+ P +V ++ H E
Sbjct: 302 SSDTISSNNVSVSVSLNTANEFSFPQGTFKAENEAVESEVAPSSSTPPTVEEISYLHYDE 361
Query: 481 PQSSMDQEPSNEISATTK 534
P PS S TTK
Sbjct: 362 PSQYYFSSPSKLSSETTK 379
>SPCC4G3.18 |||conserved fungal family|Schizosaccharomyces pombe|chr
3|||Manual
Length = 828
Score = 31.5 bits (68), Expect = 0.085
Identities = 25/113 (22%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Frame = +1
Query: 214 NEETTEQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNTTELESPINQTETTEP 393
+E + QPS+INH + I + SE N+E + + ++ + TT + +N ++ TE
Sbjct: 693 SEINSSQPSTINHGTDHINIVSE----NKETTVSLLHGDVEVEETTNV--ALNNSQDTET 746
Query: 394 QFSV-----SKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEISATTKS 537
+F+ +P+ +S+ E+++ +TT ++ ++ + T S
Sbjct: 747 KFTAIDVDFVDRPTSVVSSQIENINGDENGNTTSSVVETFEKTTDVVDEKTTS 799
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 31.5 bits (68), Expect = 0.085
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +1
Query: 316 QPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEH 471
QP S +E+ +N +TT + SK P+G S + E +S++ H
Sbjct: 106 QPLISQISSTNASVETQVNSVQTTNTTSNTSKAPNGLDSELNERLSTLTNAH 157
>SPBP22H7.02c |||RNA-binding protein Mrd1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 833
Score = 31.1 bits (67), Expect = 0.11
Identities = 24/127 (18%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Frame = +1
Query: 178 ETIPTIEPEPIDNEETTEQPSSINHASK-DIVLTSEAELANQERSREQPNFSIDQKNTTE 354
+ +P + D+ ++TE S+++ D S +EL ++E S + + + T+
Sbjct: 184 QDLPAAKRHEGDSIKSTEHDSTLDSGVVIDGREKSSSEL-HEEESEQAAEGDTAKNSGTD 242
Query: 355 LESPINQTETTEPQFS--VSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEISAT 528
++P++ E + KQP E+S + + + S ++E+ E + + + S
Sbjct: 243 AQAPLSDDEWLRLHRTRIKEKQPEEEVSVVGDELKSFDKENNDEHLERVTNDKIADASML 302
Query: 529 TKSQSSI 549
K+++++
Sbjct: 303 QKAENNV 309
>SPAC4G9.07 |mug133||S. pombe specific UPF0300 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2
Query: 140 QSNYYQ*TRNRLEKRSRP*NQNQLIMKKLQNNHRR*ITHP 259
Q + Y TR +L +R N+ ++ + KLQNNH + IT P
Sbjct: 430 QCDSYVNTREQLRRRRETLNRKRITIAKLQNNHSQ-ITFP 468
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 30.7 bits (66), Expect = 0.15
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 379 ETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEISATTKSQSS 546
+TT SVS S S+ P S S+ TT P SS S+ S+++ S SS
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTT---TTSPSSSSSSSSSSSSSSSSSSSSS 176
>SPAC977.17 |||MIP water channel|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 29.9 bits (64), Expect = 0.26
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = +1
Query: 277 SEAELANQERSREQPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPESVSS 456
S +A Q SR + +FS+ + QT+ +V + E +VS
Sbjct: 202 SSVSIAEQAASRPKVSFSLQSSRQPSIAEEQPQTQRKSSAITVEHAENAEPETPRNNVSF 261
Query: 457 VNQEHTTEPQSSMD-QEPSNEISA 525
+ E SS D P NEI A
Sbjct: 262 SRKPSIAEQDSSQDITMPPNEIIA 285
>SPAC17C9.05c |pmc3|prk1, med27|mediator complex subunit Pmc3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 273
Score = 28.3 bits (60), Expect = 0.79
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 302 NDRENNRTFPLTRKTQLN*NHRLIKQKQQNHNFQ*ANSHLEKFQ 433
ND ENN T + K+ L+ + N NFQ ++ ++E F+
Sbjct: 102 NDTENNETKSINGKSALDLKEPHHSELHDNDNFQNSDINIESFK 145
>SPAC16C9.07 |ppk5|SPAC2G11.01, mug189|serine/threonine protein
kinase Ppk5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 836
Score = 27.9 bits (59), Expect = 1.0
Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +1
Query: 232 QPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNT--TELESPINQTETTEPQFSV 405
Q SS HAS+ LTS+ + +Q+ P SI N + + + + +T P +
Sbjct: 274 QSSSYGHASQSTKLTSQRDNDHQKDLNFSPYKSIPLNNRPYSPMSEIVGFSGSTTPLDTY 333
Query: 406 SKQPSGE 426
+PSG+
Sbjct: 334 GNRPSGK 340
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 1.0
Identities = 16/55 (29%), Positives = 25/55 (45%)
Frame = +1
Query: 385 TEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEISATTKSQSSI 549
T ++ S S++ SV+ + + SS + +PS SAT S SSI
Sbjct: 924 TSSSWTAETSSSAITSSVAASVTPTSSSSASSWSSSSEVDPSTAASATGSSTSSI 978
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 27.5 bits (58), Expect = 1.4
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Frame = +1
Query: 214 NEETTEQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNTTELESPINQTETTEP 393
N++ EQ ++ +D +L EL + S + +DQ+ +E Q +
Sbjct: 971 NKKAYEQFNNFTK-QRDSLLARREELRRSQESISELTTVLDQRKDEAIERTFKQVAKSFS 1029
Query: 394 QFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMD-QEPSNEISATTKSQSSI 549
+ V P+G + S ++Q + E SMD PS + S + SI
Sbjct: 1030 EIFVKLVPAGRGELVMNRRSELSQ--SIEQDISMDIDTPSQKSSIDNYTGISI 1080
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.5 bits (58), Expect = 1.4
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Frame = +1
Query: 193 IEPEPIDNE-ETTEQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNTTELESPI 369
IE E + E +TT SK L E + + E+ +K TELE
Sbjct: 357 IELESLRKETDTTSVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKKAKTELEQAR 416
Query: 370 NQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTT--EPQSSM--DQEPSNEISATTKS 537
+ E T+ + + ++ + + IPE SV +E T E + SM D S++I+
Sbjct: 417 IELERTQREGNYARASELQYAIIPELERSVPKEEKTLEEKKPSMVHDSVTSDDIAVVVSR 476
Query: 538 QSSI 549
+ I
Sbjct: 477 ATGI 480
>SPBC25H2.11c |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 979
Score = 27.1 bits (57), Expect = 1.8
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 349 TELESPI-NQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEIS 522
T+ SP N T T+ + SK P A+ S VN+ E +++++EP ++++
Sbjct: 458 TDANSPEENNTPVTKKEVETSKPP-----AVSGSTPPVNEAAVIESSNTLEKEPLSDVA 511
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 27.1 bits (57), Expect = 1.8
Identities = 20/96 (20%), Positives = 38/96 (39%)
Frame = +1
Query: 226 TEQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNTTELESPINQTETTEPQFSV 405
++QP+ HA ++ + + + R P+ ES +Q + Q +
Sbjct: 746 SKQPTEGQHARQESLPSQQTTETKHLRKESIPSKQPSGGQQLRQESLPSQQSSESKQSTQ 805
Query: 406 SKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSN 513
+QP +I VS+ + +E S +PSN
Sbjct: 806 HQQPVEVQKSIQSDVSAPKAKEVSEKPVSHQAKPSN 841
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 27.1 bits (57), Expect = 1.8
Identities = 25/112 (22%), Positives = 44/112 (39%)
Frame = +1
Query: 211 DNEETTEQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNTTELESPINQTETTE 390
D+ E S++ LTSE + + +S E+ + TTE + IN +
Sbjct: 960 DDVGEEEVKQSVSEQVDSAQLTSEPKSESLPKSPEEKSDDTSNDVTTENTNDINGDSNMD 1019
Query: 391 PQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEISATTKSQSS 546
+V K A+ S ++V TT + +E S + ++Q S
Sbjct: 1020 NVATVDK----STDAVDTSTATVAATTTTAEEELPQKESQERSSPSPENQDS 1067
>SPBC56F2.11 |met6||homoserine
O-acetyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 489
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = +1
Query: 334 DQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSN 513
++ N E P ++ S P+ +S++P +S + ++ QSS+ + P+N
Sbjct: 279 NEGNRNRRERPCRSNGSSPTSESALNSPASSVSSLPSLGASQTTDSSSLNQSSLLRRPAN 338
>SPCC74.02c |||mRNA cleavage and polyadenylation specificity factor
complex associated protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 710
Score = 27.1 bits (57), Expect = 1.8
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +1
Query: 277 SEAELANQERSREQPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPESVSS 456
S++ L++++ S S+ N + + S +QT + S +K+PS + S
Sbjct: 66 SQSPLSHKDASLLATMPSVASSNPSLISSGSSQTGSPSQSLSSNKEPSSPGISPSNDSQS 125
Query: 457 VNQEHTTEPQSSMDQEPSNEISATTKSQSSI 549
N HT+ + PS+ S S SS+
Sbjct: 126 QNTNHTSISANPYVNNPSH-TSRNPDSGSSL 155
>SPAC22E12.01 ||SPAC890.09|triose phosphate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 364 PINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQ 486
PI + E EP+F+ S P + I + V+ V+Q PQ
Sbjct: 5 PILKVER-EPEFTPSPAPEAIVKDIEQGVAPVSQNEPDRPQ 44
>SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +2
Query: 134 KQQSNYYQ*TRNRLEKRSRP*NQNQLIMKKLQNNHRR 244
KQQ N+++ +R EKR + Q++ + +K +N RR
Sbjct: 326 KQQDNFHEQSRALKEKRKK--EQDENVRRKRENKKRR 360
>SPAC4H3.06 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 131
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/65 (26%), Positives = 35/65 (53%)
Frame = +1
Query: 256 SKDIVLTSEAELANQERSREQPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGEISA 435
+K++ L ++ L +ERS+ Q ++Q SP+ T+ +E + +S S EI+
Sbjct: 65 TKELKLLVDS-LQEKERSKLQATVKLEQLKVVSTNSPVENTQISELEARLSSL-SKEIND 122
Query: 436 IPESV 450
I +++
Sbjct: 123 ILQNM 127
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 2.4
Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 9/141 (6%)
Frame = +1
Query: 154 SVNQEPFGETIP-TIEPEPI---DNEETTEQPSSINHASKDIVLTSEA---ELANQERSR 312
S+N P + I T E E + + E E S N S DI+ ++AN +
Sbjct: 162 SLNLAPSDKEISSTEESEQLCYKEQESEKELYSKDNDDSLDILNVPNLVNDDIANNNAAP 221
Query: 313 EQPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSS 492
P ++ +TE E + +TT+ + + ++S + E +++ E +
Sbjct: 222 PPPLAQAQEQLSTENEDEFDIDDTTDKMTTFTMNKFADLSVLEEDDDDEDEDEELEGEKE 281
Query: 493 MDQEPSN--EISATTKSQSSI 549
++E EIS +++ +
Sbjct: 282 EEEEEKEKPEISNYDETEGKV 302
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 26.6 bits (56), Expect = 2.4
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 331 IDQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPESVSS 456
IDQK SPI T+ T+ S K+ +S I E +S
Sbjct: 149 IDQKPIPWSSSPIEHTKLTKSMLSSEKRSKNHLSKIYEDHTS 190
>SPBC18H10.07 |||WW domain-binding protein 4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 224
Score = 26.6 bits (56), Expect = 2.4
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +1
Query: 184 IPTIEPEPIDNEETTEQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKN 345
IPT+ + +NEET E ++ N + L E+ +E R +F + KN
Sbjct: 124 IPTLLAKQEENEETKETTTNKNESLPGTSLKRNREIIEKE-ERSSFHFRVKPKN 176
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 26.6 bits (56), Expect = 2.4
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Frame = +1
Query: 304 RSREQPN---FSIDQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPES--VSSVNQE 468
R+ PN S D +N T+ ES ++ + + + + P + SAIP+S +++ E
Sbjct: 2 RNTHNPNETEASEDAENDTQSESDLSFDHGSSEKLNRASLPKTQNSAIPQSNALNTTPNE 61
Query: 469 HTTEPQSSMDQEPSNEISATTKSQSS 546
T++ SS + PS +T + SS
Sbjct: 62 STSQIDSS-PKIPSAVPHISTPNPSS 86
>SPAC30D11.04c |nup124||nucleoporin Nup124|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1159
Score = 26.6 bits (56), Expect = 2.4
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 3/105 (2%)
Frame = +1
Query: 151 LSVNQEPFGETIPTIEPEPIDNEETTEQPSSINHASKDIVLTS-EAELANQERSREQPNF 327
+S N T + P +E+T E N+ D T+ A E++ + F
Sbjct: 772 VSSNNAVPSSTFNFVSPFAAVSEKTNE-----NNIPNDTTKTNGNATKRTLEQTEDAKPF 826
Query: 328 SIDQKNTTELESPINQT--ETTEPQFSVSKQPSGEISAIPESVSS 456
+ +TTE + T ETT+PQ S + G + P S +S
Sbjct: 827 AFSFGSTTEQANKKASTSNETTKPQLDTSSKTDGVTANAPFSFAS 871
>SPAC4F10.09c |||ribosome biogenesis protein Noc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +1
Query: 169 PFGETIPTIEPEPIDNEETTEQPSSINHASKDIVLTSEAE 288
PF ET E + +D+ ET A KD+ + ++AE
Sbjct: 813 PFNETDDEEEIQTVDHSETHSHKKKKRKAIKDLPVFADAE 852
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 3.2
Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 2/109 (1%)
Frame = +1
Query: 172 FGETIPTIEPEPIDNEETTEQP-SSINHASKDIVLTSEAELANQERSREQPNFSIDQKNT 348
F TIP +D+++TTE P + + + + E+ E E + ++ T
Sbjct: 571 FATTIPGSTSAALDDQQTTEAPFEEPDEPAHEPTEEEQEEMRKLEEKIESTKYGLETIQT 630
Query: 349 TELESPINQTETTEPQFSVSKQPSGEISAIPESV-SSVNQEHTTEPQSS 492
+ ++ + E + + + ++ E+ AI E ++Q + Q S
Sbjct: 631 SG-KTIKQRIEQKKTRLMILREELQELDAIKEEAQKQISQSLIADQQLS 678
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 25.8 bits (54), Expect = 4.2
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +1
Query: 349 TELESPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEISAT 528
T SP +T TT + S +P IS + S +S E + S PS+ +S T
Sbjct: 562 TYTTSP-EETTTTMTTTTCSSRPEETISTV--STTSTVSESGSSSASITSTYPSSTLSMT 618
Query: 529 TKSQSS 546
T SS
Sbjct: 619 TSHLSS 624
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 25.8 bits (54), Expect = 4.2
Identities = 21/114 (18%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = +1
Query: 211 DNEETTEQPSSINHASKD---IVLTSEAELANQERSREQPNFSIDQKNTTELESPINQTE 381
DNE + +H ++ I + E L+ + +S+ + + QK E E+P ++
Sbjct: 71 DNEVALFATAPYDHEDEEADKIYQSVEEHLSKRRKSQREKQEQL-QKEKYEKENPKVSSQ 129
Query: 382 TTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEISATTKSQS 543
+ + +S + + IPE ++ T +P+ S+ + A+ ++++
Sbjct: 130 FADLKRGLSTLTDEDWNNIPEPGDLTRKKRTKQPRRERFYATSDFVLASARNEN 183
>SPAC8C9.04 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 647
Score = 25.4 bits (53), Expect = 5.6
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Frame = +1
Query: 253 ASKDIVLTSEAELANQERSREQPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGEIS 432
AS EA+ A QE +EQ T +E +Q + EP ++ G +
Sbjct: 71 ASASSTPVEEAQHA-QEEQQEQTILQEPGFTQTIVEKDADQVD--EPLEPIASSALGTVE 127
Query: 433 AIPE---SVSSVNQEHTTEPQSSMDQEPSNEISATTKSQSS 546
+ S S+ TTE +++ EP+N S+++ S S+
Sbjct: 128 PPTDNKPSASTSTAVPTTEARNTSITEPANSPSSSSSSAST 168
>SPAC10F6.08c |||HMG box protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 341
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/79 (21%), Positives = 33/79 (41%)
Frame = +1
Query: 280 EAELANQERSREQPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPESVSSV 459
E LA +E++RE Q + + + + + Q + +I I + V
Sbjct: 246 EGLLAAREKAREARRRRSAQNSAKLEKEKAKEKQKDKDQEQDTVSDKNQIDEIEKGQKEV 305
Query: 460 NQEHTTEPQSSMDQEPSNE 516
++E +EP +S P N+
Sbjct: 306 DEEPVSEPTTSPILPPKNQ 324
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 25.4 bits (53), Expect = 5.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 350 VVFFWSMEKFGCSLDRSW 297
+V FW KFG +D SW
Sbjct: 875 LVLFWISSKFGNIIDASW 892
>SPCC18.01c |adg3|SPCC74.07c|beta-glucosidase Adg3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 5.6
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 3/98 (3%)
Frame = +1
Query: 190 TIEPEPIDNEETTE---QPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNTTELE 360
T++PE + TT SS +S SE+ + R + S+ Q N +
Sbjct: 978 TVKPESSLSSSTTSGLTSSSSTIPSSTRSESNSESASTSSASKRSSSSTSLVQSNPVKTV 1037
Query: 361 SPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHT 474
+ + T + S+ K P+ + + V Q HT
Sbjct: 1038 VSLESYKFTTSKISLVKNPTKTYTVTDVETNVVVQTHT 1075
>SPBP35G2.09 |usp103|yhc1|U1 snRNP-associated protein Usp103
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 182
Score = 25.4 bits (53), Expect = 5.6
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 407 ANSHLEKFQQYQSQFHP*IRNIQQNLNHQWIKNHLTKFQQQQSHNHQ 547
A+S+ + QQ QS P Q+ H NH TK Q +HQ
Sbjct: 133 ASSNTQLTQQQQSL--PQTNEHQRARTHSNANNHFTKTHHQGQRSHQ 177
>SPAC890.06 |||nucleoporin Nup157/170|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1315
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 247 NHASKDIVLTSEAELANQERSREQPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGE 426
N+AS + L NQ S++QP S K T S ++ T++ F++S + E
Sbjct: 379 NYASSRNYPANPFFLQNQSTSQQQPERSSAVKTTPMKCSSLSNIYTSDLFFAISSSNTNE 438
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 25.0 bits (52), Expect = 7.3
Identities = 16/73 (21%), Positives = 29/73 (39%)
Frame = +1
Query: 295 NQERSREQPNFSIDQKNTTELESPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHT 474
++++ + N I+ N ++ E S QP+G I + ES S +E
Sbjct: 166 DEDKHDKDSNEKIEDVNEKTIKFADKSQEEFNENGPPSGQPNGHIESDNESKSPSQKESN 225
Query: 475 TEPQSSMDQEPSN 513
+ + PSN
Sbjct: 226 ESEDIQIAETPSN 238
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 24.6 bits (51), Expect = 9.7
Identities = 22/127 (17%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Frame = +1
Query: 151 LSVNQEPFGETIPTIEPEPIDNEETTEQPSSINHASKDIVLTSEAELANQERSREQPNFS 330
L++ +EP E +D+ E+P ++++K+ + ++ + + + N
Sbjct: 68 LNMLEEPEHHDNSKKESTNLDDSNMLEEPKHHDNSNKESTNLDDLNMSEEPKHHDSSN-- 125
Query: 331 IDQKNTTELESPINQTETTEPQFSVSK-QPSGEI-SAIPESVSSVNQEHTTEPQSSMDQE 504
K +T L++ + F + + +PSG+ + P+ E +S +E
Sbjct: 126 ---KESTNLDNSNMDESENQKNFKIEEPKPSGDFRNEGPKQCDDSKIEKPELHVNSKIEE 182
Query: 505 PSNEISA 525
P + I +
Sbjct: 183 PIHRIDS 189
>SPBC646.08c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 454 SVNQEHTTEPQSSMDQEPSNEISATTK 534
+V ++HT +P SS E S TTK
Sbjct: 140 TVREDHTLDPDSSQLPTYKTEYSETTK 166
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 24.6 bits (51), Expect = 9.7
Identities = 23/114 (20%), Positives = 45/114 (39%)
Frame = +1
Query: 178 ETIPTIEPEPIDNEETTEQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQKNTTEL 357
+ I +E +P N + ++ K+ + +E L + + + + + K ++
Sbjct: 107 DEIEVVEYDPKSNAIVGTSFTRVHDYDKNSPIENEKILEDDQHTAMKEKDNESDKTMKDV 166
Query: 358 ESPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEI 519
E + E + K+P S SSVN+ + Q S D E S+ I
Sbjct: 167 EEKTEPSLKKEEEDIQMKEPLDSQDTGAVSASSVNEGFRAD-QKSKDGETSDLI 219
>SPAC29A4.16 |hal4|sat4, ppk10|halotolerence protein
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 636
Score = 24.6 bits (51), Expect = 9.7
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 355 LESPINQTETTEPQFSVSKQPSGEISAIPESVSSVNQEHTTEPQSSMDQEPSNEISATTK 534
L+S ETTEP S+QP + + S +++ +S+ Q P++ + +
Sbjct: 22 LKSTPKARETTEPPPPSSQQPPSTPNGKEAASPSALKQNVRPSLNSVQQTPASIDAVASS 81
Query: 535 SQSSI 549
S S+
Sbjct: 82 SNVSL 86
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 24.6 bits (51), Expect = 9.7
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 387 RTTIFSKQTAIWR-NFSNT---RVSFIRKSGTYNRTSIING 497
+T IF++ I R F T + FI KSGTY + +NG
Sbjct: 2 QTKIFARLAGIGRARFVGTMPDKTKFISKSGTYPQGFSLNG 42
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.297 0.115 0.292
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,085,980
Number of Sequences: 5004
Number of extensions: 42051
Number of successful extensions: 128
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 128
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 227943826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (22.0 bits)
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