Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0484
         (549 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    33   0.008
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     25   1.2  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              24   3.8  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   3.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   5.0  
AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding pr...    23   6.6  
AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding pr...    23   6.6  
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    23   6.6  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.8  

>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 32.7 bits (71), Expect = 0.008
 Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
 Frame = +2

Query: 95  HKQ*SPNRQQTLKKQQSNYY--Q*TRNRLEKRSRP*NQNQLIMKKLQNNHRR*ITHPKIL 268
           H+Q  P +QQ  ++QQ   Y     R + +++ RP  Q Q   ++ Q    R +  P+  
Sbjct: 247 HRQ--PQQQQQQQQQQGERYVPPQLRQQRQQQQRPRQQQQQQQQQQQQQGERYVP-PQ-- 301

Query: 269 Y*HLKQN*QTKNDRENNRTFPLTRKTQLN*NHRLIKQKQQNHNFQ*ANSHLEKFQQYQSQ 448
              L+Q  Q +  ++  +     R+ Q     R  +Q+QQ    Q      ++ QQ Q Q
Sbjct: 302 ---LRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQQQRQQQQQQQQQQRQQQQRQQQQQQ 358

Query: 449 FHP*IRNIQQNLNHQWIKNHLTKFQQQQSHNHQ 547
                +   Q    QW +    + Q +QS  H+
Sbjct: 359 -----QQQHQQQQQQWQQQQQQQQQPRQSLPHR 386



 Score = 31.5 bits (68), Expect = 0.019
 Identities = 35/150 (23%), Positives = 57/150 (38%)
 Frame = +2

Query: 98  KQ*SPNRQQTLKKQQSNYYQ*TRNRLEKRSRP*NQNQLIMKKLQNNHRR*ITHPKILY*H 277
           +Q  P +QQ  + QQ  +    R R  +R R   Q Q   ++ Q   R     P++    
Sbjct: 218 RQQQPQQQQLQQPQQQLWTTVVRGRPSQRHRQPQQQQ--QQQQQQGER--YVPPQLRQQR 273

Query: 278 LKQN*QTKNDRENNRTFPLTRKTQLN*NHRLIKQKQQNHNFQ*ANSHLEKFQQYQSQFHP 457
            +Q    +  ++  +      +  +    R  +Q+QQ+   Q       + QQ Q Q   
Sbjct: 274 QQQQRPRQQQQQQQQQQQQQGERYVPPQLRQQRQQQQHQQQQQQQQQQRQQQQRQQQRQQ 333

Query: 458 *IRNIQQNLNHQWIKNHLTKFQQQQSHNHQ 547
             R  QQ    Q  +    + QQQQ   HQ
Sbjct: 334 QQRQQQQQQQQQQRQQQQRQQQQQQQQQHQ 363


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
 Frame = +1

Query: 169 PFGETIPTIEP---EPIDNEETTEQPSSINHASKDIVLTSEAELANQERSREQPNFSIDQ 339
           PFG     + P    P  +    E  S  +  + +   T+EA    QE +  +   + ++
Sbjct: 101 PFGGRPWWLRPPFHRPTTSTAAPEGTSVASPTTAEASTTTEAATTTQEATTTEEATTTEE 160

Query: 340 KNTTELESPINQTETTEPQFSVSKQPSGE 426
             TTE  +   +  TTE   + ++  + E
Sbjct: 161 ATTTEKATTTEEATTTEEATTTAEATTTE 189


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 17/63 (26%), Positives = 25/63 (39%)
 Frame = +2

Query: 359 NHRLIKQKQQNHNFQ*ANSHLEKFQQYQSQFHP*IRNIQQNLNHQWIKNHLTKFQQQQSH 538
           N R  +  QQ    Q    H ++ QQ Q Q     +  QQ    +  +    + QQQQ H
Sbjct: 210 NRRGRQGPQQQEQRQQQQQHQQREQQQQQQQQQQQQQQQQQQQQRNQQREWQQQQQQQQH 269

Query: 539 NHQ 547
             +
Sbjct: 270 QQR 272



 Score = 23.0 bits (47), Expect = 6.6
 Identities = 17/62 (27%), Positives = 26/62 (41%)
 Frame = +2

Query: 362 HRLIKQKQQNHNFQ*ANSHLEKFQQYQSQFHP*IRNIQQNLNHQWIKNHLTKFQQQQSHN 541
           H+  +Q+QQ    Q      ++ QQ   Q     +  QQ   HQ  +    +  QQQ+  
Sbjct: 229 HQQREQQQQQQQQQQQQQQQQQQQQRNQQRE--WQQQQQQQQHQQREQQQQQRVQQQNQQ 286

Query: 542 HQ 547
           HQ
Sbjct: 287 HQ 288


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 353 N*NHRLIKQKQQNHNFQ*ANSHLEKFQQYQSQFH 454
           N N+ L +Q+QQ H+    + H +  QQ+Q Q+H
Sbjct: 298 NNNYILAQQQQQQHHH---HQH-QPQQQHQQQYH 327


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +3

Query: 387  RTTIFSKQTAIWRNFSNTRVSFIRKSG 467
            RTT+FS+Q  +    + ++  + R+SG
Sbjct: 1521 RTTVFSEQGMVEEFITESKAVYTRESG 1547


>AY146753-1|AAO12068.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP34 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 144 LCCFFSVCWRFGLYCLCGFSKLFLVYW 64
           LC F+S   R GLY +   +KL  +Y+
Sbjct: 200 LCFFYSFVTRSGLYSVEDGAKLERLYY 226


>AY146750-1|AAO12065.1|  311|Anopheles gambiae odorant-binding
           protein AgamOBP37 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 144 LCCFFSVCWRFGLYCLCGFSKLFLVYW 64
           LC F+S   R GLY +   +KL  +Y+
Sbjct: 200 LCFFYSFVTRSGLYSVEDGAKLERLYY 226


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 234 LFCSFFIINWFWFYGRDRF 178
           +F +FF I W +F+ R R+
Sbjct: 6   VFVAFFGIFWIYFHFRQRY 24


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 166  EPFGETIPTIEPEPI 210
            +PF E +P +EPE +
Sbjct: 1517 QPFTELVPYVEPEQL 1531


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.297    0.115    0.292 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,655
Number of Sequences: 2352
Number of extensions: 9799
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 44 (22.0 bits)