Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0482
(441 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 1e-16
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 76 1e-14
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 62 3e-10
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 53 9e-08
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 44 6e-05
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 41 4e-04
SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0) 40 0.001
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 38 0.003
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 38 0.005
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.006
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 37 0.008
SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.011
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 36 0.015
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.020
SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.026
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 35 0.026
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 35 0.034
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 35 0.034
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 35 0.034
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 32 0.24
SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061) 32 0.24
SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31) 31 0.32
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 31 0.32
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 0.56
SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29) 31 0.56
SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17) 31 0.56
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.74
SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21) 30 0.97
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.3
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 1.3
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 29 1.7
SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0) 29 2.2
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 28 3.0
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 3.9
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 27 5.2
SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0) 27 5.2
SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_49314| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-30) 27 9.1
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 83.0 bits (196), Expect = 1e-16
Identities = 41/77 (53%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +2
Query: 212 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQG 388
F ++F G +A +SKTA APIERVKLL+Q Q + K D YKG++D R + +G
Sbjct: 9 FVENFGLSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEG 68
Query: 389 LLSFWRGNFANVIRYFP 439
LSFWRGN AN IRYFP
Sbjct: 69 FLSFWRGNLANCIRYFP 85
Score = 32.7 bits (71), Expect = 0.14
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 338 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 430
+YKG +D ++I K++G +S +G AN++R
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILR 278
Score = 31.1 bits (67), Expect = 0.42
Identities = 14/71 (19%), Positives = 36/71 (50%)
Frame = +2
Query: 197 ADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIP 376
++ + F+K+ +GG + A+S V ++ + L + ++++ G++D + +
Sbjct: 108 SNAIKFSKNIASGGAAGAMSLFFVYSLDYCRTRLANDAKVGKKGGERQFNGMIDVYKKTI 167
Query: 377 KEQGLLSFWRG 409
GL+ +RG
Sbjct: 168 ASDGLVGLYRG 178
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 75.8 bits (178), Expect = 1e-14
Identities = 35/74 (47%), Positives = 54/74 (72%)
Frame = +2
Query: 218 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 397
K LAGGI+ AVS+T+V+P+ERVK+LLQ+Q + ++KG++ ++I KE+G+L
Sbjct: 36 KHLLAGGIAGAVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILG 89
Query: 398 FWRGNFANVIRYFP 439
+++GN NVIR FP
Sbjct: 90 YFKGNGTNVIRIFP 103
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 61.7 bits (143), Expect = 3e-10
Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = +2
Query: 185 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDA 361
MS + F ++F G +A +SKTA APIERVKLL+Q Q + K YKG+VD
Sbjct: 1 MSGKKQNLHFVENFALSGAAAIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDC 60
Query: 362 FVRIPKEQGLLSFWR 406
+R + +G+ SFWR
Sbjct: 61 TMRTYRAEGIGSFWR 75
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 59.7 bits (138), Expect = 1e-09
Identities = 33/69 (47%), Positives = 43/69 (62%)
Frame = +2
Query: 233 GGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 412
GG A VS+TA AP++R+K+LLQVQ A+ GIV F + +E G+ S WRGN
Sbjct: 143 GGALAGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGN 196
Query: 413 FANVIRYFP 439
ANVI+ P
Sbjct: 197 GANVIKIAP 205
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/71 (28%), Positives = 41/71 (57%)
Frame = +2
Query: 227 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 406
LAG ++ S+T++ P+E +K L ++ + Y+G++ A I +++G+ SF+R
Sbjct: 235 LAGSMAGVASQTSIYPLEVLKTRLAIRKTGQ-------YRGLLHAASVIYQKEGIRSFYR 287
Query: 407 GNFANVIRYFP 439
G F +++ P
Sbjct: 288 GLFPSLLGIIP 298
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 53.2 bits (122), Expect = 9e-08
Identities = 25/78 (32%), Positives = 44/78 (56%)
Frame = +2
Query: 206 VAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQ 385
+ + + FL GG SA ++++ +P+E VK+L QV + G++ F + K +
Sbjct: 56 ITWFQSFLCGGTSAVLARSLTSPLEVVKVLAQV-------GTQEAKPGLIRTFASVYKRE 108
Query: 386 GLLSFWRGNFANVIRYFP 439
G+ +FW+GN + IR FP
Sbjct: 109 GIKAFWKGNGVSCIRLFP 126
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +2
Query: 227 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 406
LAG S ++ V P E +K L VQHV+K ++ YKG+ A I +E+G+L+ ++
Sbjct: 157 LAGTSSTLIAMVTVYPCEVIKTRLTVQHVNK---SNAHYKGMRHALKTILREEGILALYK 213
Query: 407 GNFANVIRYFP 439
G + + FP
Sbjct: 214 GVTPSFLGLFP 224
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +2
Query: 230 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 409
AG ++ +AP++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++G
Sbjct: 39 AGSVAGLAQVPLIAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQG 97
Query: 410 NFANVIRYFP 439
N +R P
Sbjct: 98 NTVTAVRDIP 107
Score = 40.3 bits (90), Expect = 7e-04
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = +2
Query: 188 SNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFV 367
SNL A +AGG + VS + P + +K +Q + RYKG++D +
Sbjct: 124 SNLFGSRGVATYLMAGGFAGVVSWASTFPFDVIKSRIQADGNLGKF----RYKGMMDCAL 179
Query: 368 RIPKEQGLLSFWRGNFANVIRYF 436
+ KE+G++ F RG + ++R F
Sbjct: 180 QSYKEEGMIVFTRGIWPTLLRGF 202
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 42.7 bits (96), Expect = 1e-04
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +2
Query: 182 KMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ---HVSKQIAADQRYKGI 352
K+ N P + G +S +SK + P + +K +QVQ + Q+Y G+
Sbjct: 19 KVHNPYKPADVIESLTCGALSGMISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGV 78
Query: 353 VDAFVRIPKEQGLLSFWRG 409
D F I KE+G + ++G
Sbjct: 79 KDCFRTILKEEGAMGLFKG 97
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 41.1 bits (92), Expect = 4e-04
Identities = 23/61 (37%), Positives = 34/61 (55%)
Frame = +2
Query: 227 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 406
L G S ++ V P E +K L VQHV+K A YKG+ A I +E+G+L+ ++
Sbjct: 426 LVGTSSTLIAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYK 482
Query: 407 G 409
G
Sbjct: 483 G 483
>SB_3139| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 276
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Frame = +2
Query: 200 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAA---------DQRYKGI 352
DP K F + GI+A++++ A PI+ K+ LQ+Q S +A+ D Y+G+
Sbjct: 11 DPSILVK-FCSAGIAASIAEAATIPIDTAKVRLQIQGESAVMASIAQGVRTTHDAHYRGM 69
Query: 353 VDAFVRIPKEQGLLSFWRGNFANVIR 430
+ V + K +G+ + ++G + R
Sbjct: 70 LGTMVTLFKTEGMKTMYKGLIPGIHR 95
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +2
Query: 224 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 403
F +GGI+ +S P++ VK Q + +Y G D +I G+ +F
Sbjct: 361 FFSGGIAGTLSWILTYPVDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFG 420
Query: 404 RGNFANVIRYFP 439
+G A ++R FP
Sbjct: 421 QGLLATILRGFP 432
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 37.5 bits (83), Expect = 0.005
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 239 ISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFA 418
I A TAV PI+ VK +Q Q + A++ YK +D F ++ + +G + +RG
Sbjct: 922 IKKATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLP 979
Query: 419 NVIRYFP 439
++ P
Sbjct: 980 QLLGVSP 986
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 37.1 bits (82), Expect = 0.006
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 227 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 403
+ G+S+ V +A+A P + VK+ Q + + I YK + AF +I K++G L W
Sbjct: 118 IVAGVSSGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLW 173
Query: 404 RG 409
G
Sbjct: 174 TG 175
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 227 LAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 403
LA + A T VA P++ V+ Q + Y+G +D + + +G+L+ +
Sbjct: 215 LASALVAGFVATCVASPVDIVRTRFMTQPKDTK-GRPLVYQGTLDCIYKTVRHEGILALY 273
Query: 404 RGNFANVIR 430
+G F N R
Sbjct: 274 KGFFPNWTR 282
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 36.7 bits (81), Expect = 0.008
Identities = 20/72 (27%), Positives = 39/72 (54%)
Frame = +2
Query: 224 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 403
F++G + V+ + P++ V+ L VQ +S + ++ Y GIV A RI E+G+ +
Sbjct: 32 FVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGIRGLY 89
Query: 404 RGNFANVIRYFP 439
+G +++ P
Sbjct: 90 KGLVPSLVSIAP 101
>SB_46795| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 328
Score = 36.3 bits (80), Expect = 0.011
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = +2
Query: 176 SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIV 355
S K+ DP + AG I+ + + P++RVK +LQ++ + Y G V
Sbjct: 126 SYKLPVSKDP-ELLRSLAAGMIAGVATSFVLTPLDRVKCILQIE----KAFGGSSYGGPV 180
Query: 356 DAFVRIPKEQGLLSFWRGNFANVIRYFP 439
D RI +E G+ ++G +R P
Sbjct: 181 DCLRRIYREAGVRGVYKGISVTAMRDIP 208
Score = 33.5 bits (73), Expect = 0.079
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +2
Query: 218 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 397
K+ +AG + A + P++ +K+ LQ + K YK D F +I + +G+
Sbjct: 40 KNSIAGSAAGAAANLVGFPLDTIKVRLQAMPLPKP-GEPWMYKNSFDCFFKIIRNEGVYY 98
Query: 398 FWRGNFANVIRYFP 439
+RG ++ P
Sbjct: 99 LFRGVTVPILNSIP 112
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 35.9 bits (79), Expect = 0.015
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +2
Query: 269 APIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 409
AP ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 35.5 bits (78), Expect = 0.020
Identities = 18/75 (24%), Positives = 39/75 (52%)
Frame = +2
Query: 215 AKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLL 394
A++ +AG +S + A P++ +K+ LQ + K +KG +D F++ + +GL
Sbjct: 21 ARNLIAGSVSGMLGCAAGQPLDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLR 79
Query: 395 SFWRGNFANVIRYFP 439
++G + ++ P
Sbjct: 80 GLYKGMLSPLLMATP 94
>SB_16884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 300
Score = 35.1 bits (77), Expect = 0.026
Identities = 22/64 (34%), Positives = 31/64 (48%)
Frame = +2
Query: 218 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 397
K LAGGI+ + P E VK LQ+ + AA Y+G +D + K G+L
Sbjct: 42 KAILAGGIAGGLEICCTFPTEYVKTQLQLD----EKAAKPIYRGPIDCVKKTVKGHGVLG 97
Query: 398 FWRG 409
+RG
Sbjct: 98 LYRG 101
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 35.1 bits (77), Expect = 0.026
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 224 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL-LSF 400
F+ GG++ AVS+T P++ V+ +Q ++ + +Y ++ V + K+ G+
Sbjct: 176 FVCGGVAGAVSQTIAYPLDVVRRRMQ---LAGAVPDGHKYNTCINTLVNVYKDDGIRRGL 232
Query: 401 WRGNFANVIRYFP 439
+RG N +R P
Sbjct: 233 YRGLSINYLRVCP 245
Score = 30.3 bits (65), Expect = 0.74
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 350 IVDAFVRIPKEQGLLSFWRGNFANVIRYFP 439
++ AF I + +GLL++++GN A ++R FP
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFP 42
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 34.7 bits (76), Expect = 0.034
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = +2
Query: 323 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 439
I ++Y G+++AF RI +++G+ +F+RG +I P
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMP 57
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 34.7 bits (76), Expect = 0.034
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 224 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFW 403
F A IS + A P++ K +Q + I YKG +D RI + +G+ + W
Sbjct: 97 FGASMISGLATTVASMPVDIAKTRIQNMRI---IDGKPEYKGTMDVLARIVRNEGVFALW 153
Query: 404 RG 409
+G
Sbjct: 154 KG 155
Score = 31.5 bits (68), Expect = 0.32
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 341 YKGIVDAFVRIPKEQGLLSFWRGNFANVIR 430
Y + +A R+ KE+G+L+ WRG +R
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVR 64
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 34.7 bits (76), Expect = 0.034
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 230 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 409
AG ++ + AV P++ +K LQ+ + + + Y GI+D +I +GL +F++G
Sbjct: 211 AGCLAGMTASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKG 267
Query: 410 NFANVIRYFP 439
+I P
Sbjct: 268 AVPRMIVIAP 277
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 32.7 bits (71), Expect = 0.14
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 230 AGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWR 406
AG +A + P E +K LQ QH + I+ K G++D ++I + G +R
Sbjct: 112 AGSGAAFFMSFVLCPAELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFR 171
Query: 407 GNFANVIRYFP 439
G A R P
Sbjct: 172 GMTATWAREVP 182
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 31.9 bits (69), Expect = 0.24
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +2
Query: 338 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 439
+Y G+ +I +++GL +++GN N++R P
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVP 623
>SB_9806| Best HMM Match : Mito_carr (HMM E-Value=0.061)
Length = 114
Score = 31.9 bits (69), Expect = 0.24
Identities = 17/57 (29%), Positives = 30/57 (52%)
Frame = +2
Query: 236 GISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 406
G+S +KT AP+ER+K+L Q Q+ + + A I K++GL +++
Sbjct: 63 GLSTCCAKTTTAPLERLKILFQAQN------KHYKNMSVFGALKAIYKKEGLQGYYK 113
>SB_32253| Best HMM Match : Mito_carr (HMM E-Value=1.6e-31)
Length = 233
Score = 31.5 bits (68), Expect = 0.32
Identities = 20/74 (27%), Positives = 35/74 (47%)
Frame = +2
Query: 218 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 397
+ FLAGG ++ V +T P++ + L +Q Q + KG + G
Sbjct: 107 RGFLAGGCASIVGQTITVPVDIISQKLMIQ---GQGDRKVKLKGARILIRETFHQHGPGG 163
Query: 398 FWRGNFANVIRYFP 439
F++G FA+++ Y P
Sbjct: 164 FYKGYFASLMTYAP 177
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 31.5 bits (68), Expect = 0.32
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -1
Query: 246 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 112
A++PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 538 ADLPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 30.7 bits (66), Expect = 0.56
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 254 SKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 412
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_47003| Best HMM Match : Mito_carr (HMM E-Value=2.3e-29)
Length = 868
Score = 30.7 bits (66), Expect = 0.56
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 272 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 439
PI+ K +QVQ + Q A +Y+ + A I + G+ ++G A ++R P
Sbjct: 221 PIDLFKSKMQVQIIRAQSGAPIQYRNVFHAGYTIAQTYGIRGCYQGLSATLVRNIP 276
>SB_27933| Best HMM Match : Mito_carr (HMM E-Value=6.9e-17)
Length = 187
Score = 30.7 bits (66), Expect = 0.56
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +2
Query: 218 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLL 394
K+F+ G +A+ + P+E VK +Q+Q + + Y+ + A I K +G+L
Sbjct: 6 KEFVLGATAASGACFFTNPLEVVKTRMQLQGELKSRGTYSVYYRNVFHASYTIAKYEGIL 65
Query: 395 SFWRGNFANVI 427
+ +G F +I
Sbjct: 66 AMQKGLFPALI 76
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 30.7 bits (66), Expect = 0.56
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 246 AEIPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 112
A++PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1265 ADLPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 30.3 bits (65), Expect = 0.74
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 353 VDAFVRIPKEQGLLSFWRG 409
+DA ++IP+ +GL S WRG
Sbjct: 64 IDALIKIPRYEGLSSLWRG 82
>SB_6736| Best HMM Match : efhand (HMM E-Value=2.6e-21)
Length = 198
Score = 29.9 bits (64), Expect = 0.97
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +2
Query: 230 AGGISAAVSKTAVAPIERVKLLLQ 301
AGG++ S+T AP+E++K++ Q
Sbjct: 175 AGGVAGVASRTLTAPLEKMKIIAQ 198
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 292 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 393
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 292 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 393
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 292 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 393
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 292 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 393
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_16877| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 1024
Score = 28.7 bits (61), Expect = 2.2
Identities = 18/71 (25%), Positives = 31/71 (43%)
Frame = +2
Query: 227 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 406
LA GIS ++ + P E + L+ Q + Q+Y+ + +E+G +
Sbjct: 936 LAAGISKCIATSLCYPHEVARTRLRQQE--SEFLGRQKYRSFFQTLGTVLREEGWRGLYG 993
Query: 407 GNFANVIRYFP 439
G +VIR P
Sbjct: 994 GLGTHVIRQVP 1004
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 292 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 393
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +1
Query: 19 ISKKAHTYPLCSRDYEITPNLVFKNQELV----FRDPPSACAATPTSTYSPS 162
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 27.5 bits (58), Expect = 5.2
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 227 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 406
LAG + A+ PIE +K LQ+ Y+G++ + KE+G+ +F+R
Sbjct: 2 LAGACATVFHDGAMNPIEVIKQRLQMY--------GSPYRGVIHCATSVFKEEGIRAFYR 53
>SB_29345| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 313
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/74 (21%), Positives = 29/74 (39%)
Frame = +2
Query: 218 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLS 397
K+F AGG P++ +K+ LQ K + G D ++ + +G
Sbjct: 28 KNFFAGGFGGVCCIATGHPLDTIKVRLQTMPRPKP-GEKPMFTGTFDCAMKTIRNEGFFG 86
Query: 398 FWRGNFANVIRYFP 439
++G A + P
Sbjct: 87 LYKGMAAPITGVTP 100
>SB_34145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 679
Score = 27.1 bits (57), Expect = 6.9
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = -1
Query: 216 ANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI---TKH*LLIFEHEIW-SNFVITGA 49
A+ + ++ F + DY R + G +C GI T+ + +H W S F++ A
Sbjct: 346 ASCSYTSAFIAVTDYFSKWRSLATGIACAGSSVGILVMTRAIQSLLQHLGWESTFMVMSA 405
Query: 48 QRVGVCLF*NSIDPS 4
+ +C+F + DPS
Sbjct: 406 VSLSLCVFGCTYDPS 420
>SB_49314| Best HMM Match : 7tm_1 (HMM E-Value=5.4e-30)
Length = 300
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +2
Query: 32 HTPTLCAPVITKLLQISCSKIRS*CFVIPHPRVPQLPPRHIHLVKIT 172
H C PV+ L K + ++ H RV PPR +H++ +T
Sbjct: 256 HVNACCNPVVYSLHNPKLRKCMN--RLVHHKRVRTSPPRAVHVLAMT 300
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,712,273
Number of Sequences: 59808
Number of extensions: 267043
Number of successful extensions: 744
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 859323430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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