Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0481
         (611 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    62   1e-11
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   0.36 
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          26   0.83 

>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 62.1 bits (144), Expect = 1e-11
 Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 10/90 (11%)
 Frame = +3

Query: 369 VENETGRFFVQYNNVPMGVEKVGDRLFITVPRRRYGIPSTLNYVDLTTDSNTRSPALRPY 548
           ++ E G  ++   N+PMG     +R+F+ V RRR+GIPSTLN VDL+      +  L+PY
Sbjct: 41  LQRENG--YIPIGNIPMGAVHHKNRVFVAVARRRWGIPSTLNVVDLSPPFPNTNVILKPY 98

Query: 549 PS-----LR-----EGSSLVSVYRTRADEC 608
           P+     LR     + + +V+VYR R D C
Sbjct: 99  PNFALNELRADLQPDANRIVTVYRPRVDRC 128


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.5 bits (58), Expect = 0.36
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +2

Query: 236 QKEETN*QRIQTRQSESAIKSRRSTPQAELESIQT--RNRETIREACRERNRK 388
           Q+E    ++ Q R+ E   K  R   Q E E  +   R +E  REA RER R+
Sbjct: 477 QREREQREKEQ-REKEQREKEERERQQREKEQREREQREKEREREAARERERE 528


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 26.2 bits (55), Expect = 0.83
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +2

Query: 278 SESAIKSRRSTPQAELESIQTRNRETIREACRERNRKIL 394
           S S ++    TP A  ++  T  R    E  RER  K+L
Sbjct: 870 SPSMVRKALGTPTASRKTAGTLPRNDFEEMLRERREKVL 908


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,327
Number of Sequences: 2352
Number of extensions: 10533
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)