Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0480
         (682 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein p...    25   2.9  
DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.       24   5.1  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   5.1  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   5.1  
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        23   6.7  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   6.7  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   8.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   8.9  

>AB090815-1|BAC57905.1|  492|Anopheles gambiae gag-like protein
           protein.
          Length = 492

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 23/96 (23%), Positives = 44/96 (45%)
 Frame = +3

Query: 51  QRIFFIKIMFSDEAHFQLGGYVNKQSCRIRGSQNPQTLFEKPLHPKKVTVWCGLCTQSLL 230
           + I  ++I+   +A  +L  +  K+  RIRG++N   LFE      K    CG+    ++
Sbjct: 265 ENITHVEILRKLKADPELQAF-GKKVVRIRGTKNGGLLFEL----GKSDDDCGVDYAKVV 319

Query: 231 SSILCDQKIYARIHHIEDQDIRYGYKEMAGASIEPD 338
            + + +      +  +E  +IRY   E   + +E D
Sbjct: 320 QNSIGNNGTVKTLGQMETVEIRYFDAETQTSDVEKD 355


>DQ974164-1|ABJ52804.1|  410|Anopheles gambiae serpin 4C protein.
          Length = 410

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 438 RHFPTWLHN*TTPRVAIFIDH 376
           R+  +W+HN T  R+A  + H
Sbjct: 85  RYINSWVHNQTHGRIADIVSH 105


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 535 ADNDSVLKWEIGVEHHEIKFQIKRRDEEGNEEVVHGPRKI 654
           A +D+ L+  + VE HE  +++           VHGP ++
Sbjct: 170 AASDACLECFLAVEEHEQPYELTVEASSDRGLSVHGPTEL 209


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +1

Query: 535 ADNDSVLKWEIGVEHHEIKFQIKRRDEEGNEEVVHGPRKI 654
           A +D+ L+  + VE HE  +++           VHGP ++
Sbjct: 170 AASDACLECFLAVEEHEQPYELTVEASSDRGLSVHGPTEL 209


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 576 FHSDFPFQNAVVVRTQQI*DVLLSGLYGD 490
           F +D  FQ++ V+  Q+  +  L GL+ D
Sbjct: 77  FKTDLRFQSSAVMALQEASEAYLVGLFED 105


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 108 GYVNKQ-SCRIRGSQNPQTLFEKPLHP 185
           G++ K   C ++ SQN + LFE+ + P
Sbjct: 497 GWIGKTCECNLQNSQNRRELFEQCVAP 523


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 406 YTSGRHFHRPSSRRSEPVAGPYRSGSILAPAISLY-PYRIS*SSIWC 269
           +T   H+++PS    +P+  P    + L    SL+ PY IS S   C
Sbjct: 193 HTGLHHYYQPSPSHPQPIV-PQPQRASLERRDSLFRPYDISKSPRLC 238


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 406 YTSGRHFHRPSSRRSEPVAGPYRSGSILAPAISLY-PYRIS*SSIWC 269
           +T   H+++PS    +P+  P    + L    SL+ PY IS S   C
Sbjct: 193 HTGLHHYYQPSPSHPQPIV-PQPQRASLERRDSLFRPYDISKSPRLC 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 749,346
Number of Sequences: 2352
Number of extensions: 16796
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)