Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0480
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92970-3|CAB07482.1| 383|Caenorhabditis elegans Hypothetical pr... 58 8e-09
AF077545-3|AAC26304.1| 396|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical pr... 41 0.001
U58734-6|AAB52505.3| 383|Caenorhabditis elegans Hypothetical pr... 38 0.007
Z69793-4|CAA93675.3| 382|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical pr... 32 0.44
AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical ... 31 0.58
Z34801-6|CAA84329.1| 428|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z77136-4|CAB00881.1| 526|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical p... 28 5.4
Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical p... 28 5.4
AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,... 28 5.4
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,... 28 5.4
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,... 28 5.4
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 5.4
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,... 28 5.4
AF070920-1|AAC24231.1| 554|Caenorhabditis elegans cytoplasmic s... 28 5.4
AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic s... 28 5.4
AF059608-1|AAD13737.1| 526|Caenorhabditis elegans N2,N2-dimethy... 28 5.4
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip... 28 5.4
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip... 28 5.4
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip... 28 5.4
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip... 28 5.4
U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical... 28 7.1
AL117195-2|CAB60773.1| 245|Caenorhabditis elegans Hypothetical ... 28 7.1
>Z92970-3|CAB07482.1| 383|Caenorhabditis elegans Hypothetical
protein H06O01.3 protein.
Length = 383
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = +1
Query: 214 APKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQ-AQVLNLIDKDQLPVHYGGTMVDEN 390
AP++ +A++ I + + +++ KW AQ++NL D P+++GG +V EN
Sbjct: 191 APEMARIAYASITAILQDPITRLVEMPSESDWKWSLAQIVNL---DAWPMYWGGNLV-EN 246
Query: 391 GDPRCSLIVKPGGKVPKCYYSKNTSEKQKNYNKV-TIKTGEKHVLDLLCADNDSVLKWEI 567
GDP+C +K GG Y + + +Y+++ T+ G+KH++ + S + W
Sbjct: 247 GDPKCPSRIKYGGGAVDESYFVDPKKAMADYDQLTTVYAGDKHLIQIK-VKRPSRISWTY 305
Query: 568 GVEHHEIKFQI 600
+ +I F+I
Sbjct: 306 MTDEDDIGFEI 316
>AF077545-3|AAC26304.1| 396|Caenorhabditis elegans Hypothetical
protein H41C03.1 protein.
Length = 396
Score = 49.6 bits (113), Expect = 2e-06
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 214 APKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGTMVDENG 393
AP +L + I + E T +K++I ++ W+ V D +P H+GGT+VD+NG
Sbjct: 188 APSFMTLLWKAIGPLLPERTRNKVRICSGNSD-WKTSVQKHAHIDNIPKHWGGTLVDKNG 246
Query: 394 DPRCSLIVK-PGGKVPKCYYSKNTSE 468
D C I+ P +P+ Y T E
Sbjct: 247 DGMCRDILNIPFDSIPQELYWTPTHE 272
>Z72508-9|CAA96639.2| 410|Caenorhabditis elegans Hypothetical
protein F28H7.8 protein.
Length = 410
Score = 40.7 bits (91), Expect = 0.001
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Frame = +1
Query: 175 HYIQRK*PYGAVCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQL 354
HY + + + +P ++ +S + F+ E + +I G++ W+ ++L+++DK+ L
Sbjct: 189 HYREFIDKFIVINSPSYINVLWSALSPFIPEQSKQRIVFAGSN---WKEELLDIVDKECL 245
Query: 355 PVHYGGTMVDENGDPRCSLIVKPGGKVPKCYYSKNTSE--KQKNYNKVTIKTGEKHVL 522
P YGG + D +C +KP +PK Y K ++ +KV++ + +L
Sbjct: 246 PERYGGMI----PDIQC---LKPVDPIPKSLYWKLPAQYPTMDQLHKVSVSASKHRML 296
>U58734-6|AAB52505.3| 383|Caenorhabditis elegans Hypothetical
protein T27A10.7 protein.
Length = 383
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/130 (18%), Positives = 59/130 (45%)
Frame = +1
Query: 217 PKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGTMVDENGD 396
P + S ++++ + T K++ D W+ ++ I ++ + +H+GG E+
Sbjct: 209 PAMMSAVYAMVSPVLSSQTREKVRFLDKD---WKNHLIEEIGEENIFMHWGGVKKHEH-- 263
Query: 397 PRCSLIVKPGGKVPKCYYSKNTSEKQKNYNKVTIKTGEKHVLDLLCADNDSVLKWEIGVE 576
C ++ GGKVP+ + ++ + + + K+ + K + + ++ W V
Sbjct: 264 -PCG-DIRMGGKVPESLWYADSHKLEGDRTKIAVPARSKTEIKMY-GESGKYFHWLWRVS 320
Query: 577 HHEIKFQIKR 606
+I F I++
Sbjct: 321 SGDIDFSIEK 330
>Z69793-4|CAA93675.3| 382|Caenorhabditis elegans Hypothetical
protein R03A10.5 protein.
Length = 382
Score = 36.3 bits (80), Expect = 0.020
Identities = 28/117 (23%), Positives = 45/117 (38%)
Frame = +1
Query: 172 NHYIQRK*PYGAVCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQ 351
+HY++ + VC P + + V++ + E T K+++ G W+ VL
Sbjct: 182 DHYVEMIKYFVPVCVPSFATALYVVVRPLLPEKTREKVRLIG--ETNWRDDVLQYAIHSS 239
Query: 352 LPVHYGGTMVDENGDPRCSLIVKPGGKVPKCYYSKNTSEKQKNYNKVTIKTGEKHVL 522
LP + G I P G YYS KN V + G+ HV+
Sbjct: 240 LPSIWNNENHTFGG-----FIELPIGYPTDGYYSAKNHSVVKNAQTVNVPYGKIHVV 291
>Z66524-6|CAA91418.2| 408|Caenorhabditis elegans Hypothetical
protein T13H5.2 protein.
Length = 408
Score = 36.3 bits (80), Expect = 0.020
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Frame = +1
Query: 208 VCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGTMVDE 387
V P + +S+I + + T K+KI G D W+ + I ++ L +GGT E
Sbjct: 213 VNTPTFIQVLWSMISPCLAKQTQQKVKILGND---WKQHLKENIGEEVLFERWGGTRKAE 269
Query: 388 NGDPRCSLIVKPGGKVP-KCYYSKNTSEKQKNYNKVTIKTGEKHVLDLLCADN--DSVLK 558
V+ GGK+P + Y + K+ + + + N L
Sbjct: 270 TEYGN----VRMGGKIPAELKYDPANDLPAEKLTKLNVSARSTTFVPITLEGNVPGRKLY 325
Query: 559 WEIGVEHHEIKFQIKRRDEEGNEEV 633
W +E+++I F I R EG E+V
Sbjct: 326 WWWRLENNDINFSILRA-AEGEEKV 349
>Z74041-4|CAD56597.1| 394|Caenorhabditis elegans Hypothetical
protein T03F7.7b protein.
Length = 394
Score = 31.9 bits (69), Expect = 0.44
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Frame = +1
Query: 217 PKVFSLAFSVIKKFMHEYTISKIKIFGT--DTKKWQAQVLNLIDKDQLPVHYGGTMVDEN 390
P + S+ + V K+ + T+ K+ D KK+ ++ + +PV YGGT D+
Sbjct: 206 PGIISVMWQVTKRLVDPNTVEKLAFLSNVEDLKKY-------LEPEAIPVEYGGTYRDDT 258
Query: 391 G--DP---RC---SLIVKPGGKVPKCYYSKN---TSEKQKNYNKVTIKTGEKHVLDLLCA 537
G DP C I K K + + KN + K K+Y+ +T E ++
Sbjct: 259 GYADPPEGACKQPKRITKEDYKPQEYIWVKNGILKAPKGKSYSIKAFQTSEY----IIKT 314
Query: 538 DNDSVLKWEIGVEHHEIKFQIKRRD 612
+ L W ++ F+I +RD
Sbjct: 315 TTEGKLVWNY-TTSGDVDFEIVKRD 338
>Z74041-3|CAA98522.1| 368|Caenorhabditis elegans Hypothetical
protein T03F7.7a protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.44
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 13/145 (8%)
Frame = +1
Query: 217 PKVFSLAFSVIKKFMHEYTISKIKIFGT--DTKKWQAQVLNLIDKDQLPVHYGGTMVDEN 390
P + S+ + V K+ + T+ K+ D KK+ ++ + +PV YGGT D+
Sbjct: 206 PGIISVMWQVTKRLVDPNTVEKLAFLSNVEDLKKY-------LEPEAIPVEYGGTYRDDT 258
Query: 391 G--DP---RC---SLIVKPGGKVPKCYYSKN---TSEKQKNYNKVTIKTGEKHVLDLLCA 537
G DP C I K K + + KN + K K+Y+ +T E ++
Sbjct: 259 GYADPPEGACKQPKRITKEDYKPQEYIWVKNGILKAPKGKSYSIKAFQTSEY----IIKT 314
Query: 538 DNDSVLKWEIGVEHHEIKFQIKRRD 612
+ L W ++ F+I +RD
Sbjct: 315 TTEGKLVWNY-TTSGDVDFEIVKRD 338
>AF098501-8|AAC67403.1| 459|Caenorhabditis elegans Hypothetical
protein H28G03.4 protein.
Length = 459
Score = 31.5 bits (68), Expect = 0.58
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = +3
Query: 69 KIMFSDEAHFQLGGYVNKQSCRIRGSQNPQTLFEKPLHPKKVTVWCGLCTQSLLSSILCD 248
K++F+DE F + N Q+ R+ P + ++ +PK + V+ G+ I
Sbjct: 215 KVLFTDEKIFCIEQSFNTQNDRVYAKTQPNSRVQRTGYPKGIMVFAGITANGKTPLIFVP 274
Query: 249 QKI 257
Q I
Sbjct: 275 QGI 277
>Z34801-6|CAA84329.1| 428|Caenorhabditis elegans Hypothetical
protein F59A2.4a protein.
Length = 428
Score = 28.7 bits (61), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +1
Query: 601 KRRDEE--GNEEVVHGPRKIAXGPMDVG 678
K+R+E+ GN GPR + GP DVG
Sbjct: 99 KKREEQAAGNSNKAKGPRLLLVGPTDVG 126
>Z77136-4|CAB00881.1| 526|Caenorhabditis elegans Hypothetical
protein ZC376.5 protein.
Length = 526
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/55 (20%), Positives = 29/55 (52%)
Frame = +1
Query: 238 FSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGTMVDENGDPR 402
++ +++F + T++ ++ F D +KW + L +++ P ++E+G R
Sbjct: 39 YNPVQEFNRDLTVTVLRQFSADHQKWAEEQKQLKTEEEPPKKKNKLAINEDGKIR 93
>Z66500-11|CAC42334.1| 625|Caenorhabditis elegans Hypothetical
protein T05C12.6c protein.
Length = 625
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 229 RRLWVHKPH--HTVTFFGCSGFSKSVCGFCEPRMRQ 128
R+ W+ +P ++ ++G S FS SV +PR R+
Sbjct: 587 RKWWLRRPSADSSIQYYGSSSFSDSVAERSQPRFRR 622
>Z66500-10|CAB61022.1| 666|Caenorhabditis elegans Hypothetical
protein T05C12.6b protein.
Length = 666
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 229 RRLWVHKPH--HTVTFFGCSGFSKSVCGFCEPRMRQ 128
R+ W+ +P ++ ++G S FS SV +PR R+
Sbjct: 628 RKWWLRRPSADSSIQYYGSSSFSDSVAERSQPRFRR 663
>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2857
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 609 PSFYLKFYFVMFHSDFPFQNAVVVRTQQI*DVLLSGLYGDFIVILLFFTGILRVVTFRH 433
P Y F + ++ QN + T+ ++ +GL +ILL+F IL + FRH
Sbjct: 2550 PMIYCILLFDIIFTEETLQNVIASVTRNYQSIVWTGLLA---LILLYFFSILGFLYFRH 2605
>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2836
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 609 PSFYLKFYFVMFHSDFPFQNAVVVRTQQI*DVLLSGLYGDFIVILLFFTGILRVVTFRH 433
P Y F + ++ QN + T+ ++ +GL +ILL+F IL + FRH
Sbjct: 2529 PMIYCILLFDIIFTEETLQNVIASVTRNYQSIVWTGLLA---LILLYFFSILGFLYFRH 2584
>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 609 PSFYLKFYFVMFHSDFPFQNAVVVRTQQI*DVLLSGLYGDFIVILLFFTGILRVVTFRH 433
P Y F + ++ QN + T+ ++ +GL +ILL+F IL + FRH
Sbjct: 2585 PMIYCILLFDIIFTEETLQNVIASVTRNYQSIVWTGLLA---LILLYFFSILGFLYFRH 2640
>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 609 PSFYLKFYFVMFHSDFPFQNAVVVRTQQI*DVLLSGLYGDFIVILLFFTGILRVVTFRH 433
P Y F + ++ QN + T+ ++ +GL +ILL+F IL + FRH
Sbjct: 2539 PMIYCILLFDIIFTEETLQNVIASVTRNYQSIVWTGLLA---LILLYFFSILGFLYFRH 2594
>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
1,4,5-trisphosphate receptorprotein.
Length = 2846
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 609 PSFYLKFYFVMFHSDFPFQNAVVVRTQQI*DVLLSGLYGDFIVILLFFTGILRVVTFRH 433
P Y F + ++ QN + T+ ++ +GL +ILL+F IL + FRH
Sbjct: 2539 PMIYCILLFDIIFTEETLQNVIASVTRNYQSIVWTGLLA---LILLYFFSILGFLYFRH 2594
>AF070920-1|AAC24231.1| 554|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 554
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 229 RRLWVHKPH--HTVTFFGCSGFSKSVCGFCEPRMRQ 128
R+ W+ +P ++ ++G S FS SV +PR R+
Sbjct: 516 RKWWLRRPSADSSIQYYGSSSFSDSVAERSQPRFRR 551
>AF063244-1|AAC16434.1| 666|Caenorhabditis elegans cytoplasmic
signalling transducer protein.
Length = 666
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = -1
Query: 229 RRLWVHKPH--HTVTFFGCSGFSKSVCGFCEPRMRQ 128
R+ W+ +P ++ ++G S FS SV +PR R+
Sbjct: 628 RKWWLRRPSADSSIQYYGSSSFSDSVAERSQPRFRR 663
>AF059608-1|AAD13737.1| 526|Caenorhabditis elegans
N2,N2-dimethylguanosine tRNA methyltransferase protein.
Length = 526
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/55 (20%), Positives = 29/55 (52%)
Frame = +1
Query: 238 FSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGTMVDENGDPR 402
++ +++F + T++ ++ F D +KW + L +++ P ++E+G R
Sbjct: 39 YNPVQEFNRDLTVTVLRQFSADHQKWAEEQKQLKTEEEPPKKKNKLAINEDGKIR 93
>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform e protein.
Length = 2857
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 609 PSFYLKFYFVMFHSDFPFQNAVVVRTQQI*DVLLSGLYGDFIVILLFFTGILRVVTFRH 433
P Y F + ++ QN + T+ ++ +GL +ILL+F IL + FRH
Sbjct: 2550 PMIYCILLFDIIFTEETLQNVIASVTRNYQSIVWTGLLA---LILLYFFSILGFLYFRH 2605
>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform f protein.
Length = 2846
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 609 PSFYLKFYFVMFHSDFPFQNAVVVRTQQI*DVLLSGLYGDFIVILLFFTGILRVVTFRH 433
P Y F + ++ QN + T+ ++ +GL +ILL+F IL + FRH
Sbjct: 2539 PMIYCILLFDIIFTEETLQNVIASVTRNYQSIVWTGLLA---LILLYFFSILGFLYFRH 2594
>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform d protein.
Length = 2836
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 609 PSFYLKFYFVMFHSDFPFQNAVVVRTQQI*DVLLSGLYGDFIVILLFFTGILRVVTFRH 433
P Y F + ++ QN + T+ ++ +GL +ILL+F IL + FRH
Sbjct: 2529 PMIYCILLFDIIFTEETLQNVIASVTRNYQSIVWTGLLA---LILLYFFSILGFLYFRH 2584
>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
triphosphate receptorprotein 1, isoform a protein.
Length = 2892
Score = 28.3 bits (60), Expect = 5.4
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -2
Query: 609 PSFYLKFYFVMFHSDFPFQNAVVVRTQQI*DVLLSGLYGDFIVILLFFTGILRVVTFRH 433
P Y F + ++ QN + T+ ++ +GL +ILL+F IL + FRH
Sbjct: 2585 PMIYCILLFDIIFTEETLQNVIASVTRNYQSIVWTGLLA---LILLYFFSILGFLYFRH 2640
>U55366-3|AAY86188.1| 118|Caenorhabditis elegans Hypothetical
protein F41F3.8 protein.
Length = 118
Score = 27.9 bits (59), Expect = 7.1
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1
Query: 184 GCSGFSKSVCGFCEPRMR 131
GC G S S+CG C PR R
Sbjct: 25 GCGGPSLSLCGGCAPRPR 42
>AL132862-14|CAB60548.1| 541|Caenorhabditis elegans Hypothetical
protein Y73F8A.20 protein.
Length = 541
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +2
Query: 614 RKATRKWSTGRGRSPXVRWTSAC 682
+++T ++ G SP +RWT+AC
Sbjct: 34 QQSTESSNSSEGDSPAIRWTTAC 56
>AL117195-2|CAB60773.1| 245|Caenorhabditis elegans Hypothetical
protein Y57A10A.3 protein.
Length = 245
Score = 27.9 bits (59), Expect = 7.1
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -3
Query: 317 CHFFVSVPNILIFDMVYSCI 258
C FF +PN+L F +++S I
Sbjct: 210 CFFFAKLPNLLYFSVIFSLI 229
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,316,562
Number of Sequences: 27780
Number of extensions: 366021
Number of successful extensions: 1070
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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