Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0480
(682 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g19650.1 68414.m02449 SEC14 cytosolic factor, putative / phos... 42 3e-04
At4g39170.1 68417.m05547 SEC14 cytosolic factor, putative / phos... 41 7e-04
At2g16380.1 68415.m01874 SEC14 cytosolic factor family protein /... 41 9e-04
At1g75370.1 68414.m08754 SEC14 cytosolic factor, putative / phos... 41 9e-04
At2g21540.1 68415.m02563 SEC14 cytosolic factor, putative / phos... 40 0.001
At4g39180.1 68417.m05548 SEC14 cytosolic factor, putative / phos... 38 0.006
At1g22180.3 68414.m02773 SEC14 cytosolic factor family protein /... 38 0.006
At1g22180.2 68414.m02774 SEC14 cytosolic factor family protein /... 38 0.006
At1g22180.1 68414.m02772 SEC14 cytosolic factor family protein /... 38 0.006
At4g36490.1 68417.m05181 SEC14 cytosolic factor, putative / phos... 38 0.008
At4g34580.1 68417.m04913 SEC14 cytosolic factor, putative / phos... 38 0.008
At2g18180.1 68415.m02115 SEC14 cytosolic factor, putative / phos... 37 0.014
At1g65920.1 68414.m07480 regulator of chromosome condensation (R... 36 0.019
At3g24840.1 68416.m03116 SEC14 cytosolic factor, putative / phos... 36 0.033
At1g01630.1 68414.m00080 SEC14 cytosolic factor, putative / phos... 36 0.033
At2g21520.1 68415.m02561 SEC14 cytosolic factor, putative / phos... 34 0.076
At1g75170.1 68414.m08731 SEC14 cytosolic factor family protein /... 32 0.31
At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /... 31 0.53
At3g26420.1 68416.m03295 glycine-rich RNA-binding protein simila... 30 1.6
At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /... 30 1.6
At5g22650.2 68418.m02647 expressed protein non-consensus AT dono... 29 2.2
At5g22650.1 68418.m02646 expressed protein non-consensus AT dono... 29 2.2
At4g36640.1 68417.m05200 SEC14 cytosolic factor family protein /... 29 2.8
At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /... 29 2.8
At5g47730.1 68418.m05897 SEC14 cytosolic factor, putative / poly... 28 5.0
At3g56430.1 68416.m06276 expressed protein unknown protein At2g4... 28 5.0
At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding famil... 28 6.6
At4g08690.1 68417.m01432 SEC14 cytosolic factor family protein /... 28 6.6
At5g66100.1 68418.m08327 La domain-containing protein similar to... 27 8.7
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 27 8.7
At1g09820.1 68414.m01104 pentatricopeptide (PPR) repeat-containi... 27 8.7
>At1g19650.1 68414.m02449 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
SP:P24859 from [Kluyveromyces lactissimilar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; contains Pfam PF00650 :
CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO,
N-terminus
Length = 608
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGT 375
F L + +K F+ T+SKI + G K+Q ++L +ID QLP +GGT
Sbjct: 269 FKLLWGTVKSFLDPKTVSKIHVLGN---KYQNKLLEMIDASQLPDFFGGT 315
>At4g39170.1 68417.m05547 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus] and
phosphatidylinositol-phosphatidylcholine transfer
protein SEC14, Yarrowia lipolytica, PIR2:S43745;contains
Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 614
Score = 41.1 bits (92), Expect = 7e-04
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGG--TMVDENGDP 399
F L +S +K F+ T SKI + G K+Q+++L +ID +LP GG T D+ G
Sbjct: 273 FRLLWSTVKSFLDPKTTSKIHVLGC---KYQSKLLEIIDSSELPEFLGGACTCADQGG-- 327
Query: 400 RCSLIVKPGGKVPK 441
C L K K P+
Sbjct: 328 -CMLSDKGPWKNPE 340
>At2g16380.1 68415.m01874 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to phosphatidylinositol
transfer-like protein III (GI:14486705) [Lotus
japonicus]
Length = 547
Score = 40.7 bits (91), Expect = 9e-04
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGG--TMVDENG 393
F L ++ IKKF+ T SKI + G K+Q ++L ID +LP +GG T D+ G
Sbjct: 253 FRLLWAPIKKFLDPKTTSKIHVLG---NKYQPKLLEAIDASELPYFFGGLCTCADKGG 307
>At1g75370.1 68414.m08754 SEC14 cytosolic factor, putative /
phosphatidylinositol transfer-like protein, putative
similar to phosphatidylinositol transfer-like protein
III (GI:14486705) [Lotus japonicus]; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminu
Length = 612
Score = 40.7 bits (91), Expect = 9e-04
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGT 375
F L ++ +K+F+ T++KI + G K+Q ++L +ID QLP GGT
Sbjct: 278 FKLVWATVKQFLDPKTVTKIHVIGN---KYQNKLLEIIDASQLPDFLGGT 324
>At2g21540.1 68415.m02563 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; contains Pfam PF00650
: CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO,
N-terminus
Length = 548
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 13/119 (10%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGG--TMVDENG-- 393
F L +S +K F+ T +KI + G K+Q+++L +ID ++LP GG T D+ G
Sbjct: 260 FRLLWSTVKSFLDPKTTAKIHVLGN---KYQSKLLEIIDSNELPEFLGGNCTCADKGGCM 316
Query: 394 --------DPRCSLIVKPG-GKVPKCYYSKNTSEKQKNYNKVTIKTGEKHVLDLLCADN 543
DP +V+ G GK P+ S N EK + ++ T + + A+N
Sbjct: 317 RSDKGPWNDPDIFKMVQNGEGKCPRKTLS-NIEEKTISVDENTTMKSDSFAKNKFDAEN 374
>At4g39180.1 68417.m05548 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative
phosphatidylinositol-phosphatidylcholine transfer
protein SEC14, Yarrowia lipolytica, PIR2:S43745;
contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam
PF03765 : CRAL/TRIO, N-terminus
Length = 554
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGG--TMVDENG 393
F L ++ +K F+ T +KI + G K+Q ++L +ID ++LP GG T D+ G
Sbjct: 261 FRLLWNTVKSFLDPKTTAKIHVLGN---KYQTKLLEIIDANELPEFLGGKCTCADKGG 315
>At1g22180.3 68414.m02773 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
profile: PF00650 CRAL/TRIO domain; similar to
polyphosphoinositide binding protein Ssh1p (GI:|2739044)
{Glycine max}; similar to Phosphatidylinositol Transfer
Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae]
Length = 249
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +1
Query: 160 HSSKNHYIQRK*PYGAVCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLI 339
H + HY +R PK+F + ++K F+ T +K+K +D + +L
Sbjct: 106 HVLQEHYPERLGLAIVYNPPKIFESFYKMVKPFLEPKTSNKVKFVYSDDNLSNKLLEDLF 165
Query: 340 DKDQLPVHYGGTMVD 384
D +QL V +GG D
Sbjct: 166 DMEQLEVAFGGKNSD 180
>At1g22180.2 68414.m02774 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
profile: PF00650 CRAL/TRIO domain; similar to
polyphosphoinositide binding protein Ssh1p (GI:|2739044)
{Glycine max}; similar to Phosphatidylinositol Transfer
Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae]
Length = 314
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +1
Query: 160 HSSKNHYIQRK*PYGAVCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLI 339
H + HY +R PK+F + ++K F+ T +K+K +D + +L
Sbjct: 171 HVLQEHYPERLGLAIVYNPPKIFESFYKMVKPFLEPKTSNKVKFVYSDDNLSNKLLEDLF 230
Query: 340 DKDQLPVHYGGTMVD 384
D +QL V +GG D
Sbjct: 231 DMEQLEVAFGGKNSD 245
>At1g22180.1 68414.m02772 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
profile: PF00650 CRAL/TRIO domain; similar to
polyphosphoinositide binding protein Ssh1p (GI:|2739044)
{Glycine max}; similar to Phosphatidylinositol Transfer
Protein Sec14p (GI:2780955) [Saccharomyces cerevisiae]
Length = 249
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/75 (28%), Positives = 35/75 (46%)
Frame = +1
Query: 160 HSSKNHYIQRK*PYGAVCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLI 339
H + HY +R PK+F + ++K F+ T +K+K +D + +L
Sbjct: 106 HVLQEHYPERLGLAIVYNPPKIFESFYKMVKPFLEPKTSNKVKFVYSDDNLSNKLLEDLF 165
Query: 340 DKDQLPVHYGGTMVD 384
D +QL V +GG D
Sbjct: 166 DMEQLEVAFGGKNSD 180
>At4g36490.1 68417.m05181 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; contains Pfam PF00650 :
CRAL/TRIO domain; contains Pfam PF03765 : CRAL/TRIO,
N-terminus; supporting cDNA gi|23463078|gb|BT000834.1|
Length = 543
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGG--TMVDENG 393
F + ++ +K F+ T +KI + G K+Q+++L +ID+ +LP GG T D G
Sbjct: 243 FRMLWNTVKSFLDPKTTAKIHVLGN---KYQSKLLEIIDESELPEFLGGSCTCADNGG 297
>At4g34580.1 68417.m04913 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein III
(GI:14486705) [Lotus japonicus]; similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; similar SEC14 protein,
Saccharomyces cerevisiae, PIR2:A30106; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 560
Score = 37.5 bits (83), Expect = 0.008
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGTMVDEN 390
F L +S +K F+ T +KI + G K+ +++L +ID +LP +GG E+
Sbjct: 253 FRLLWSTVKSFLDPKTTAKIHVLGN---KYHSKLLEVIDASELPEFFGGACTCED 304
>At2g18180.1 68415.m02115 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative contains
Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminussimilar to phosphatidylinositol
transfer-like protein IV (GI:14486707) [Lotus
japonicus];
Length = 558
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGG--TMVDENG 393
F + ++ +K F+ T +KI + G K+Q+++L +ID +LP GG T D G
Sbjct: 246 FRMLWNTVKSFLDPKTTAKIHVLGN---KYQSKLLEIIDASELPEFLGGSCTCADNGG 300
>At1g65920.1 68414.m07480 regulator of chromosome condensation
(RCC1) family protein / zinc finger protein-related
contains Pfam profiles: regulator of chromosome
condensation (RCC1), PF01363 FYVE zinc finger
Length = 1006
Score = 36.3 bits (80), Expect = 0.019
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Frame = +1
Query: 406 SLIVKPGGKVPKCYYSKNTSEKQKNYNKVTIKTGEKHVLDLLCADNDSVLKWEIGV---- 573
S+I G++ + + S++++ + GE H LDL+C D W G+
Sbjct: 67 SVITIVRGQITPNFQKQAQSDRKEQSFSLIYANGE-HTLDLICKDKAQADSWFKGLRAVI 125
Query: 574 -EHHEIKFQIKRRDEEGNEEVVHGPRKIAXGPMDVGV 681
+HH I+ + R G + ++ P ++G+
Sbjct: 126 TKHHNIRNSVNHRSSRGAQSCINSPAGFMRRKQNLGL 162
>At3g24840.1 68416.m03116 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; similar to SEC14
CYTOSOLIC FACTOR (PHOSPHATIDYLINOSITOL/
PHOSPHATIDYLCHOLINE TRANSFER PROTEIN) GB:P46250 from
[Candida albicans] (Yeast (1996) 12(11), 1097-1105);
contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam
PF03765 : CRAL/TRIO, N-terminus
Length = 579
Score = 35.5 bits (78), Expect = 0.033
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGG 372
F L ++ +K F+ T SKI + G K+++ +L +ID +LP GG
Sbjct: 268 FKLVWNTVKGFLDPKTTSKIHVLGN---KYRSHLLEIIDPSELPEFLGG 313
>At1g01630.1 68414.m00080 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative contains
Pfam PF00650 : CRAL/TRIO domain and PF03765 : CRAL/TRIO,
N-terminus; similar to polyphosphoinositide binding
protein Ssh2p GB:AAB94599 GI:2739046 from [Glycine max]
Length = 255
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/57 (40%), Positives = 30/57 (52%)
Frame = +1
Query: 208 VCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGTM 378
V AP +F A+ VI F+ T K KI + KK +L ID+ QLP YGG +
Sbjct: 193 VHAPYIFMTAWKVIYPFIDANT--KKKIVFVENKKLTPTLLEDIDESQLPDIYGGKL 247
>At2g21520.1 68415.m02561 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative contains
Pfam PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to phosphatidylinositol
transfer-like protein IV (GI:14486707) [Lotus japonicus]
Length = 631
Score = 34.3 bits (75), Expect = 0.076
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 226 FSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGG--TMVDENGDP 399
F L ++ +K F+ T +KI + G K+ +++L +ID ++LP GG T D+ G
Sbjct: 279 FRLLWNTVKSFLDPKTSAKIHVLGY---KYLSKLLEVIDVNELPEFLGGACTCADQGG-- 333
Query: 400 RCSLIVKPGGKVPK 441
C L K K P+
Sbjct: 334 -CMLSDKGPWKNPE 346
>At1g75170.1 68414.m08731 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to SEC14 cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis]
and to SEC14 cytosolic factor (SP:P53989) [Candida
glabrata]
Length = 296
Score = 32.3 bits (70), Expect = 0.31
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +1
Query: 169 KNHYIQRK*PYGAVCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKD 348
+NHY +R P++F + ++K F+ T K+K + + D++
Sbjct: 173 QNHYPERLAVAFLYNPPRLFEAFWKIVKYFIDAKTFVKVKFVYPKNSESVELMSTFFDEE 232
Query: 349 QLPVHYGG 372
LP +GG
Sbjct: 233 NLPTEFGG 240
>At1g72160.1 68414.m08343 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
GI:807956 from [Saccharomyces cerevisiae]similar to
polyphosphoinositide binding protein Ssh2p (GI:2739046)
{Glycine max}; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 490
Score = 31.5 bits (68), Expect = 0.53
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Frame = +1
Query: 217 PKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGTMVDE-NG 393
P + + ++VI FM + SK+ +F ++ + + I +Q+PV YGG VD +
Sbjct: 322 PWWYLVFYTVIGPFMTPRSKSKL-VFAGPSRSAET-LFKYISPEQVPVQYGGLSVDPCDC 379
Query: 394 DPRCSLIVKPGGKVPKCYYSKNTSEKQKNYNKVTIKTGEKHVLDLLCADNDSVLKWEIGV 573
+P SL + + +++T+K G K ++++ + L WEI V
Sbjct: 380 NPDFSL--------------------EDSASEITVKPGTKQTVEIIIYEK-CELVWEIRV 418
Query: 574 EHHEIKFQIKRRDEEGN--EEVVHGPRKI 654
E+ ++ + EE + V+ PRK+
Sbjct: 419 TGWEVSYKAEFVPEEKDAYTVVIQKPRKM 447
>At3g26420.1 68416.m03295 glycine-rich RNA-binding protein similar
to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotiana
sylvestris]; contains Pfam profile: PF00076 RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 245
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 246 DQKIYARIHHIEDQDIRYGYKEMAGASIEPDR*GPATGSLRRDDG 380
D + ++ +D RYG ++ G+ PDR G G RD G
Sbjct: 177 DDRYSSKDDRYSSKDDRYGSRDGGGSRYGPDRSGERAGGRSRDGG 221
>At1g30690.1 68414.m03752 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus; similar to cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24280) [Saccharomyces
cerevisiae]; ESTs gb|T76582, gb|N06574 and gb|Z25700
come from this gene
Length = 540
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 241 SVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGG-TMVDE---NGDPRCS 408
+V+ F+ + T SK + K + +L I D+LPV YGG VD+ + +
Sbjct: 381 AVLSPFLTQRTKSKFVV--ARPAKVRETLLKYIPADELPVQYGGFKTVDDTEFSNETVSE 438
Query: 409 LIVKPG 426
++VKPG
Sbjct: 439 VVVKPG 444
>At5g22650.2 68418.m02647 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 223
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 543 RQRFEMGNRSGTSRNKISNKTKGRGR 620
++ F G + G S NK SNK KG+GR
Sbjct: 197 KKPFNSGKQFGGSNNKGSNKGKGKGR 222
>At5g22650.1 68418.m02646 expressed protein non-consensus AT donor
splice site at exon 3, AC acceptor splice site at exon
4;
Length = 306
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 543 RQRFEMGNRSGTSRNKISNKTKGRGR 620
++ F G + G S NK SNK KG+GR
Sbjct: 280 KKPFNSGKQFGGSNNKGSNKGKGKGR 305
>At4g36640.1 68417.m05200 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max, SEC14 cytosolic factor
(Phosphatidylinositol/phosphatidylcholine transfer
protein) (PI/PCTP) (SP:P24859) [Kluyveromyces lactis]
and to SEC14 cytosolic factor (SP:P53989) [Candida
glabrata]
Length = 294
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/71 (23%), Positives = 28/71 (39%)
Frame = +1
Query: 160 HSSKNHYIQRK*PYGAVCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLI 339
H +N+Y +R P++F + K F+ T K+K K +
Sbjct: 167 HILQNYYPERLGIAFLYNPPRLFQAVYRAAKYFLDPRTAEKVKFVYPKDKASDELMTTHF 226
Query: 340 DKDQLPVHYGG 372
D + LP +GG
Sbjct: 227 DVENLPKEFGG 237
>At4g09160.1 68417.m01517 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
polyphosphoinositide binding protein Ssh1p (GI:2739044)
{Glycine max}; similar to polyphosphoinositide binding
protein Ssh2, Glycine max, gb:T05953; contains Pfam
PF00650 : CRAL/TRIO domain; contains Pfam PF03765 :
CRAL/TRIO, N-terminus
Length = 668
Score = 29.1 bits (62), Expect = 2.8
Identities = 30/141 (21%), Positives = 63/141 (44%), Gaps = 2/141 (1%)
Frame = +1
Query: 238 FSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQLPVHYGGTMVDENGDPRCSLIV 417
+ +I FM + + SK+ +F ++ + +L I + +PV YGG VD C
Sbjct: 504 YRIISPFMSQRSKSKL-VFAGPSRSAET-LLKYISPEHVPVQYGGLSVD-----NC---- 552
Query: 418 KPGGKVPKCYYSKNTSEKQKNYNKVTIKTGEKHVLDLLCADNDSVLKWEIGVEHHEIKF- 594
+C + ++T+K K ++++ + +++ WEI V E+ +
Sbjct: 553 -------EC---NSDFTHDDIATEITVKPTTKQTVEIIVYEKCTIV-WEIRVVGWEVSYG 601
Query: 595 -QIKRRDEEGNEEVVHGPRKI 654
+ ++EG ++ PRK+
Sbjct: 602 AEFVPENKEGYTVIIQKPRKM 622
>At5g47730.1 68418.m05897 SEC14 cytosolic factor, putative /
polyphosphoinositide-binding protein, putative similar
to polyphosphoinositide binding protein SEC14 homolog
Ssh1p (GI:2739044) {Glycine max}
Length = 341
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/61 (26%), Positives = 30/61 (49%)
Frame = +1
Query: 175 HYIQRK*PYGAVCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTKKWQAQVLNLIDKDQL 354
+Y ++ Y V AP +FS + V+K + E T K+ + + ++L ++D L
Sbjct: 182 NYPEKTNTYYVVNAPYIFSACWKVVKPLLQERTRKKVHVLSGCGRD---ELLKIMDFTSL 238
Query: 355 P 357
P
Sbjct: 239 P 239
>At3g56430.1 68416.m06276 expressed protein unknown protein
At2g40800 - Arabidopsis thaliana, EMBL:AC007660
Length = 434
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 450 LEEYQ*KTEELQ*SHHKDRREARLRFAVCGQRQRFEMGNRSGTSRNKISNKTK 608
+EE + ELQ + K+R E L+ A +R+ FE+ R +I K
Sbjct: 382 IEEEEDAERELQEAERKEREEIELQEAERKEREEFELQEAERKQREEIEKLEK 434
>At5g44800.1 68418.m05492 chromodomain-helicase-DNA-binding family
protein / CHD family protein similar to chromatin
remodeling factor CHD3 (PICKLE) [Arabidopsis thaliana]
GI:6478518; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00628: PHD-finger, PF00385: 'chromo'
(CHRromatin Organization MOdifier)
Length = 2228
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -1
Query: 403 TSGRHFHRPSSRRSEPVAGPY 341
+S R++ RP SR++ P+ GP+
Sbjct: 1490 SSRRNYSRPGSRQNRPITGPH 1510
>At4g08690.1 68417.m01432 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein contains Pfam
PF00650: CRAL/TRIO domain; similar to
polyphosphoinositide binding protein Ssh2p (GI:2739046)
[Glycine max]; similar to SEC14-like protein (GB:U82515)
[D. discoideum]
Length = 301
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +1
Query: 130 VAYEAHKIHKHSSKNHYIQRK*PYGAVCAPKVFSLAFSVIKKFMHEYTISKIKIFGTDTK 309
V+ K H + HY +R PK F + V + F+ T +K+K +D
Sbjct: 158 VSLRTTKETAHVLQEHYPERLAFAVLYNPPKFFEPFWKVARPFLEPKTRNKVKFVYSDDP 217
Query: 310 KWQAQVLNLIDKDQLPVHYGGTMVDENG 393
+ + D +++ + +GG D++G
Sbjct: 218 NTKVIMEENFDMEKMELAFGGN--DDSG 243
>At5g66100.1 68418.m08327 La domain-containing protein similar to
SP|P40796 La protein homolog (La ribonucleoprotein) (La
autoantigen homolog) {Drosophila melanogaster}; contains
Pfam profile PF05383: La domain
Length = 453
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 537 GQRQRFEMGNRSGTSRNKISNKTKGRGRQRGSG 635
G R+ +E GN+SG S S + QRG G
Sbjct: 231 GNRRNYEHGNQSGFSHRNYSGRDMHLQPQRGVG 263
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator
of chromosome condensation (RCC1) family protein similar
to zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 409 LIVKPGGKVPKCYYSKNTSEKQKNYNKVTIKTGEKHVLDLLCADNDSVLKWEIGVE 576
L + PG + P K +K Y ++ ++ LDL+C D D W +G++
Sbjct: 67 LRIVPGQRTPTF---KRYPRPEKEYQSFSLICPDRS-LDLICKDKDEAEVWVVGLK 118
>At1g09820.1 68414.m01104 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 606
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 228 LSSILCDQKIYARIHHIEDQDIRYGYKEMAGASIEPD 338
LS++ C + A + D+ Y YKEM I+P+
Sbjct: 186 LSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPN 222
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,194,025
Number of Sequences: 28952
Number of extensions: 332934
Number of successful extensions: 984
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1438152744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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