Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0479
         (693 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    26   0.25 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.1  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   9.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.6  

>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -2

Query: 677 HIIIGTIYLFYLFITLRSDPSIQDVVLLLSF 585
           H I   + +FY+   L S+P + D V+LL+F
Sbjct: 244 HFIFIVVSIFYMSAYLISNPIMWDRVMLLTF 274


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -1

Query: 219 LFIRYNEIYKLGYILVYS 166
           L  R+NEI+ LG +L+++
Sbjct: 232 LVTRFNEIFGLGLLLMFA 249


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 219 LFIRYNEIYKLGYILVY 169
           L  R+NEI+ LG +L++
Sbjct: 588 LVTRFNEIFGLGLLLMF 604


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 289 SALYFVAIFFL*YKSVLVYLSI 354
           SALYF+ I FL +   L+ L I
Sbjct: 234 SALYFLTIIFLFFIIPLIILLI 255


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 132 ENSHSSNQEPFKIRISTLFFFRCLHFVRLFLV 37
           +N + +      ++ +TLFFF     V +FLV
Sbjct: 170 QNRYETVAHGMTVQKTTLFFFNRTFGVPIFLV 201


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +2

Query: 104 GSWFELCEFS 133
           G +F+LCEFS
Sbjct: 458 GLYFQLCEFS 467


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,830
Number of Sequences: 336
Number of extensions: 3424
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)