Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0479
         (693 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119616-1|AAM50270.1|  809|Drosophila melanogaster LD43174p pro...    29   7.9  
AE014297-2400|AAN13751.2|  809|Drosophila melanogaster CG7660-PB...    29   7.9  
AE014297-2399|AAF55458.2|  831|Drosophila melanogaster CG7660-PA...    29   7.9  

>AY119616-1|AAM50270.1|  809|Drosophila melanogaster LD43174p
           protein.
          Length = 809

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 78  FFFRCLHFVRLFLVPNP 28
           F  RCL+FVRL LVP+P
Sbjct: 371 FGVRCLNFVRLSLVPSP 387


>AE014297-2400|AAN13751.2|  809|Drosophila melanogaster CG7660-PB,
           isoform B protein.
          Length = 809

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 78  FFFRCLHFVRLFLVPNP 28
           F  RCL+FVRL LVP+P
Sbjct: 371 FGVRCLNFVRLSLVPSP 387


>AE014297-2399|AAF55458.2|  831|Drosophila melanogaster CG7660-PA,
           isoform A protein.
          Length = 831

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -1

Query: 78  FFFRCLHFVRLFLVPNP 28
           F  RCL+FVRL LVP+P
Sbjct: 371 FGVRCLNFVRLSLVPSP 387


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,499,118
Number of Sequences: 53049
Number of extensions: 539708
Number of successful extensions: 1106
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)