Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0478
(687 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38975| Best HMM Match : Serpin (HMM E-Value=0) 103 1e-22
SB_55237| Best HMM Match : Serpin (HMM E-Value=0) 83 3e-16
SB_55238| Best HMM Match : Serpin (HMM E-Value=0) 82 4e-16
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2) 29 3.5
SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08) 29 4.7
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20) 28 8.1
SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_38975| Best HMM Match : Serpin (HMM E-Value=0)
Length = 380
Score = 103 bits (248), Expect = 1e-22
Identities = 53/181 (29%), Positives = 98/181 (54%), Gaps = 1/181 (0%)
Frame = +3
Query: 144 SAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANK 323
S S++ LA L + G T ++ K FP D + ++ + + G ++ MAN+
Sbjct: 33 SPASIVVALAMTYLGARGNTATQMTKTFHFPTDVPEKFHDFLQALNASNSDGNQILMANR 92
Query: 324 VYVHDGGKLDENFAVVSXDVFNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPD 500
++ G ++ E F S + F++++ +D+ KN+ A+ ++N WVE+ T ++IK+L+
Sbjct: 93 LFAQMGFEILEEFKKASKESFSAEMALVDYVKNSNGARDTVNRWVEQKTKDKIKNLIPEG 152
Query: 501 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGESAA 680
+ T LVNA+YFKG+W F+ T F + + I+V MY+ +++Y ES+
Sbjct: 153 MFNKDTILCLVNAVYFKGSWMKHFNRNATQSGKFKTTPSQEIQVQFMYQSSEFRYLESST 212
Query: 681 L 683
L
Sbjct: 213 L 213
>SB_55237| Best HMM Match : Serpin (HMM E-Value=0)
Length = 363
Score = 82.6 bits (195), Expect = 3e-16
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 7/168 (4%)
Frame = +3
Query: 168 LAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRD---LRSIKGV-ELKMANKVYVH 335
L + L S G T ++ G+ + + T K L S G E+++ NK++ H
Sbjct: 5 LGLVYLGSRGTTAIQIANIFGWKESEFEETHRTFKQFHEALLTSDLGYGEIQLVNKIWGH 64
Query: 336 DGGKLDENFAVVSXDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 512
D ++ E F + + ++S++ +DF +K A K +N WV + T IK+L+ ++S
Sbjct: 65 DEFEILEEFLHGTREFYHSEMAQVDFVNKAFDARKEVNAWVHQQTKGNIKELIPHGVINS 124
Query: 513 ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYV--SKDKTIKVPMMYKR 650
T ++VNA+YFKG W +F E T F+V S + I+V MM ++
Sbjct: 125 LTRLIIVNAVYFKGVWKKEFGEENTFHAAFFVPESHESKIEVEMMTRK 172
>SB_55238| Best HMM Match : Serpin (HMM E-Value=0)
Length = 345
Score = 82.2 bits (194), Expect = 4e-16
Identities = 36/122 (29%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +3
Query: 303 ELKMANKVYVHDGGKLDENFAVVSXDVFNSDVQNIDFSKNTVAA-KSINDWVEENTNNRI 479
E+ +AN +++ + + F + +++D+ +D+ + A K +N WVEE T +I
Sbjct: 49 EMSIANNLFLQKDFSILKEFTDICQKYYDADISLVDYKTDFEGARKHVNQWVEERTKKKI 108
Query: 480 KDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDY 659
DL+ P + T LVNAIYFKG W F + + +F + ++V MM+++ +
Sbjct: 109 CDLIAPGVFNMLTRLTLVNAIYFKGMWDKPFKKEHSHSSEFRTTSSNEVEVEMMFQKSKF 168
Query: 660 KY 665
KY
Sbjct: 169 KY 170
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 31.1 bits (67), Expect = 0.87
Identities = 39/199 (19%), Positives = 75/199 (37%), Gaps = 3/199 (1%)
Frame = -3
Query: 598 SRSLVSRSSNLELHAPLK*MALTRTAAVAELSESGLTKSLMRLLVFSSTQSLIDLAATVF 419
S S+V + + PLK + TAA + + + ++ T + AAT
Sbjct: 1089 SSSMVQAKAASSITTPLKTTVVAVTAAATTTAATTIAAAVTASTASVVTTTATVAAATTT 1148
Query: 418 FEKSMFWTSELKTSXETTAKXXXXXXXX*TYTLFAILSSTPLIDRRSRLLLANSVRIASS 239
EK+ T+ + + T A T T A +++ ++ L A V A++
Sbjct: 1149 AEKATTTTAAMVKATTTAAAVTASTASVVTKT--ATVAAATTTAEKATTLTAAMVE-ATT 1205
Query: 238 SGKPIAFKSSSWVSPSEAKAN*ARGG---STENAERTTLFPGLFFTTSVNILAVKLSFPF 68
+ + ++S V+ + KA +T T TT+ I + ++ P
Sbjct: 1206 TAAAVTASTASVVTTTAEKATTTTAAMVEATTTEAAVTASTASVVTTTATIASSTITTPS 1265
Query: 67 LSTLERFVTAAIAAMAIVN 11
LS + +++ A N
Sbjct: 1266 LSAISTTTASSVQVSAATN 1284
>SB_5257| Best HMM Match : SlyX (HMM E-Value=2.2)
Length = 641
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = +3
Query: 345 KLDENFAVVSXDVFNSDVQNIDFSKNTVAAKSINDW---VEENTNNRIKD 485
K +E+ + S +F+ + +N+DFS + ++ DW VE N ++D
Sbjct: 460 KFEEDLRISS--MFSGEGENVDFSTDLYPTGNVEDWLLEVENTMRNSLRD 507
>SB_55414| Best HMM Match : 7tm_1 (HMM E-Value=4.3e-08)
Length = 595
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +3
Query: 30 AMAAVTNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDG 197
+MAAV + +L+ + + + ++KNN +S+ AF+ L L L L+S+G
Sbjct: 36 SMAAVCRPAGLLEPDHFALPVAVESLILKNNSIRSIAKGAFNGLDKLLTLDLSSNG 91
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 28.7 bits (61), Expect = 4.7
Identities = 34/154 (22%), Positives = 65/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 174 QLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLD 353
Q+ +SD + L + F ++DA SK + ++++ K+Y +D
Sbjct: 703 QVTTSSDVNNALDELDEVQFSEEDARGIRGLSKDATFK----IKIEEKRKLYQISKAAVD 758
Query: 354 ENFAVVSXDVFNSDVQNIDFSKNTVA--AKSINDWVEENTNNRIKDLVNPDSLSSATAAV 527
+ D F ++ D S N+ + +++N+N+ + D +L A V
Sbjct: 759 GDTGSKMADRFLEQLER-DPSANSDGRGTDEPSGHLDKNSNSEVSDETLEKTLK---ANV 814
Query: 528 LVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIK 629
N KG++S D+ SD +S DK++K
Sbjct: 815 QDNIKVTKGSFSDSSDKSSGSDNTDKMSSDKSVK 848
>SB_27683| Best HMM Match : Exo_endo_phos (HMM E-Value=1.5e-20)
Length = 672
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 195 HQKLKLTEREEAAPKMPRGQRFSL 124
HQ L + E + ++PK PR +F L
Sbjct: 56 HQNLSINEMDSSSPKRPRQHQFGL 79
>SB_24891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 195 HQKLKLTEREEAAPKMPRGQRFSL 124
HQ L + E + ++PK PR +F L
Sbjct: 21 HQNLSINEMDSSSPKRPRQHQFGL 44
>SB_11238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 195 HQKLKLTEREEAAPKMPRGQRFSL 124
HQ L + E + ++PK PR +F L
Sbjct: 50 HQNLSINEMDSSSPKRPRQHQFGL 73
>SB_48263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 195 HQKLKLTEREEAAPKMPRGQRFSL 124
HQ L + E + ++PK PR +F L
Sbjct: 21 HQNLSINEMDSSSPKRPRQHQFGL 44
>SB_30045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 27.9 bits (59), Expect = 8.1
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 671 LSIFIIAAFIHHGYFDCF 618
LS++++ +HH YF CF
Sbjct: 298 LSLYVVVVTVHHHYFFCF 315
>SB_29987| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 27.9 bits (59), Expect = 8.1
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 195 HQKLKLTEREEAAPKMPRGQRFSL 124
HQ L + E + ++PK PR +F L
Sbjct: 7 HQNLSINEMDSSSPKCPRQHQFGL 30
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,504,144
Number of Sequences: 59808
Number of extensions: 379382
Number of successful extensions: 1130
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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