Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0478
(687 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 95 5e-20
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 91 6e-19
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 85 5e-17
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 82 3e-16
At1g64030.1 68414.m07252 serpin family protein / serine protease... 82 4e-16
At2g14540.1 68415.m01628 serpin family protein / serine protease... 78 6e-15
At1g62170.1 68414.m07013 serpin family protein / serine protease... 78 6e-15
At2g35580.1 68415.m04357 serpin family protein / serine protease... 69 3e-12
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 64 6e-11
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 64 1e-10
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 1.3
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 2.2
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 29 2.2
At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containi... 29 3.8
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 3.8
At5g01060.1 68418.m00009 protein kinase family protein contains ... 28 5.0
At3g15920.1 68416.m02013 phox (PX) domain-containing protein wea... 28 5.0
At2g43210.2 68415.m05371 UBX domain-containing protein contains ... 28 5.0
At2g43210.1 68415.m05370 UBX domain-containing protein contains ... 28 5.0
At2g32620.1 68415.m03982 cellulose synthase family protein simil... 28 6.7
At2g20210.1 68415.m02363 leucine-rich repeat family protein cont... 27 8.8
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 94.7 bits (225), Expect = 5e-20
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 8/210 (3%)
Frame = +3
Query: 51 LSNVLKNGNDNFTARMFTEVVKNNP--GKSVVLSAFSVLPPLAQLALASDGETHEELLKA 224
L ++N N N AR+ +V++ + G +VV S S+ L+ +A S+ T EE+L
Sbjct: 3 LGKSIENQN-NVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSF 61
Query: 225 IGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAVVSXDVFNSDVQN 404
+ P D + A + + L A+ V++ L +F + + + +
Sbjct: 62 LMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQ 121
Query: 405 IDFSKNTVAA-KSINDWVEENTNNRIKDLVNPDSLSSA-----TAAVLVNAIYFKGAWSS 566
+DF+ V +N W + +TN IK +++ D + + +L NA+YFK AWS
Sbjct: 122 VDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAWSR 181
Query: 567 KFDERLTSDRDFYVSKDKTIKVPMMYKRGD 656
KFD +LT D DF++ T+KVP M D
Sbjct: 182 KFDAKLTKDNDFHLLDGNTVKVPFMMSYKD 211
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 91.1 bits (216), Expect = 6e-19
Identities = 58/190 (30%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Frame = +3
Query: 126 GKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE 305
G ++V S S+ L +A S+ T E++L I P D + A K+ + G+E
Sbjct: 28 GSNLVFSPMSINVLLCLIAAGSNCVTKEQILSFIMLPSSDYLNAVLA-KTVSVALNDGME 86
Query: 306 -----LKMANKVYVHDGGKLDENFAVVSXDVFNSDVQNIDFS-KNTVAAKSINDWVEENT 467
L A V++ +F + + +N+ +DF+ K +N W E +T
Sbjct: 87 RSDLHLSTAYGVWIDKSLSFKPSFKDLLENSYNATCNQVDFATKPAEVINEVNAWAEVHT 146
Query: 468 NNRIKDLVNPDSLSSATAAVLV--NAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 641
N IK++++ DS+ + ++L+ NA+YFKGAWS KFD +LT DF++ +KVP M
Sbjct: 147 NGLIKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFM 206
Query: 642 --YKRGDYKY 665
YK+ +Y
Sbjct: 207 TNYKKQYLEY 216
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 84.6 bits (200), Expect = 5e-17
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Frame = +3
Query: 81 NFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTE 260
N + T V +N+ +V+ S S+ L+ +A S G T +++L + F D + +
Sbjct: 16 NLAKHVITTVSQNS---NVIFSPASINVVLSIIAAGSAGATKDQILSFLKFSSTDQLNS- 71
Query: 261 FASKS-----RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSXDVFNSDVQNIDF-SKN 422
F+S+ D + G +L +AN ++ +F + D + + DF SK
Sbjct: 72 FSSEIVSAVLADGSANGGPKLSVANGAWIDKSLSFKPSFKQLLEDSYKAASNQADFQSKA 131
Query: 423 TVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDF 602
+N W E+ TN I +++ S S T + NA+YFKG W+ KFDE LT + +F
Sbjct: 132 VEVIAEVNSWAEKETNGLITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEF 191
Query: 603 YVSKDKTIKVPMM 641
++ + P M
Sbjct: 192 HLLDGNKVTAPFM 204
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 82.2 bits (194), Expect = 3e-16
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Frame = +3
Query: 300 VELKMANKVYVHDGGKLDENFAVVSXDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNR 476
+ L +AN V++ L +F + + + + +DF SK + +N W E +TN
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 477 IKDLVNPDSLSS--ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 641
IK +++ DS+ + ++ VL NA+YFKGAWSSKFD +T DF++ ++KVP M
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPFM 141
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 81.8 bits (193), Expect = 4e-16
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 6/176 (3%)
Frame = +3
Query: 132 SVVLSAFSVLPPLAQLALASDGE-THEELLKAIGFPDDDAIRTEFASKSR----DLRSIK 296
+V+ S S+ + A G+ ++L + D ++T F + D +
Sbjct: 30 NVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVFRELASVVYADRSATG 89
Query: 297 GVELKMANKVYVHDGGKLDENFAVVSXDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNN 473
G ++ AN +++ D F + + F + +DF S+ K +N WVE +TNN
Sbjct: 90 GPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTNN 149
Query: 474 RIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 641
IKDL+ S++S T + NA+ FKGAW F++ T D DFY+ ++ VP M
Sbjct: 150 LIKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFM 205
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 77.8 bits (183), Expect = 6e-15
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Frame = +3
Query: 48 NLSNVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEEL- 215
++ +KN N+ ++ + V KN+ + V S S+ L A +D +T
Sbjct: 30 DMQEAMKNQNEVSLLLVGKVISAVAKNS---NCVFSPASINAVLTVTAANTDNKTLRSFI 86
Query: 216 ---LKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVYVHDGGKLDENFAVVSXDV 383
LK+ + +AI E AS +D G ++ N V++ + ++ + +
Sbjct: 87 LSFLKSSSTEETNAIFHELASVVFKDGSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNF 146
Query: 384 FNSDVQNIDFSKNTVAAK-SINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAW 560
F + +DF + +N W +TN+ IK+++ S++S T + NA+YFKGAW
Sbjct: 147 FKASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAW 206
Query: 561 SSKFDERLTSDRDFYVSKDKTIKVPMM 641
FD+ +T D+ F++ K++ VP M
Sbjct: 207 EKAFDKSMTRDKPFHLLNGKSVSVPFM 233
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 77.8 bits (183), Expect = 6e-15
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 14/223 (6%)
Frame = +3
Query: 15 TIAIAAMAAVTNLS--NVLKNGNDN---FTARMFTEVVKNNPGKSVVLSAFSVLPPLAQL 179
T + A +++N+ +K ND T + + V KN+ + V S S+ L +
Sbjct: 50 TDLVIASPSLSNIDVGEAMKKQNDVAIFLTGIVISSVAKNS---NFVFSPASINAALTMV 106
Query: 180 ALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVE--LKMANKVYVHDGGKLD 353
A +S GE EEL I + E + R++ S+ V+ K K+ V +G +D
Sbjct: 107 AASSGGEQGEELRSFILSFLKSSSTDELNAIFREIASVVLVDGSKKGGPKIAVVNGMWMD 166
Query: 354 ENFAV--VSXDVF----NSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLVNPDSLSS 512
++ +V +S D+F ++ +DF SK +N W +TN IKDL+ S++S
Sbjct: 167 QSLSVNPLSKDLFKNFFSAAFAQVDFRSKAEEVRTEVNAWASSHTNGLIKDLLPRGSVTS 226
Query: 513 ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 641
T V +A+YFKG W K+ + +T + FY+ ++ VP M
Sbjct: 227 LTDRVYGSALYFKGTWEEKYSKSMTKCKPFYLLNGTSVSVPFM 269
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 68.9 bits (161), Expect = 3e-12
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Frame = +3
Query: 168 LAQLALASDGETHE-----ELLKAIGFPDDDAIRTEFASKS-RDLRSIKGVELKMANKVY 329
L+ +A +S G+T LL+A A+ +E + D + G + AN ++
Sbjct: 40 LSIIAASSPGDTDTADKIVSLLQASSTDKLHAVSSEIVTTVLADSTASGGPTISAANGLW 99
Query: 330 VHDGGKLDENFAVVSXDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNRIKDLV--NPD 500
+ ++ +F + + + + +DF +K + +N WVE+ TN I +L+ NP
Sbjct: 100 IEKTLNVEPSFKDLLLNSYKAAFNRVDFRTKADEVNREVNSWVEKQTNGLITNLLPSNPK 159
Query: 501 SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 641
S + T + NA++F G W S+FD LT D DF++ ++VP M
Sbjct: 160 S-APLTDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFM 205
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 64.5 bits (150), Expect = 6e-11
Identities = 29/75 (38%), Positives = 46/75 (61%)
Frame = +3
Query: 441 INDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDK 620
+N W +TN IK+L+ P S+++ T + NA+YFKGAW +KF + +T + F++ K
Sbjct: 39 VNSWALRHTNGLIKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHLVNGK 98
Query: 621 TIKVPMMYKRGDYKY 665
+ VP M K + KY
Sbjct: 99 QVLVPFM-KSYERKY 112
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/69 (42%), Positives = 42/69 (60%)
Frame = +3
Query: 435 KSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSK 614
+ +N W ++TN I DL+ S+ S T V NA+YFKGAW +KFD+ T D +F+ K
Sbjct: 14 QELNKWASDHTNGLIIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGK 73
Query: 615 DKTIKVPMM 641
+ + VP M
Sbjct: 74 E--VHVPFM 80
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 146 REDNAFPWIIFHYFGKHSGCEVIVSIFEHIREICDG 39
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 170 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEHI 57
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 105 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELL 218
E VKN +PGK VL +++L P AQL + + E E L+
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLV 675
>At5g08510.1 68418.m01009 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 511
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +3
Query: 45 TNLSNVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKA 224
T +S +NGN + +MF + K+ K ++ SVLP A L G E +
Sbjct: 184 TVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARE 243
Query: 225 IGFPDD 242
GF D+
Sbjct: 244 NGFFDN 249
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 143 EDNAFPWIIFHYFGKHSGCEVIVSIFEHIRE 51
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g01060.1 68418.m00009 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 499
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 114 KNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFA 266
KN P K+ + L P +D + ELL+ +G+ +D+ + EF+
Sbjct: 337 KNLPEKTKPATESLKLTPFGDACSRADLSSIHELLEKLGYEEDNGVGNEFS 387
>At3g15920.1 68416.m02013 phox (PX) domain-containing protein weak
similarity to myosin heavy chain [Rana catesbeiana]
GI:4249699; contains Pfam profile PF00787: PX domain
Length = 755
Score = 28.3 bits (60), Expect = 5.0
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +3
Query: 333 HDGGKLDENFAVVSXDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVN----PD 500
HD DE + ++++N+ FS+N+ A ++ DW E T + D + +
Sbjct: 262 HDNDSADETSNASTMKHDEANLKNL-FSRNSTAVDNVTDWHELITEYGLLDQSSFQEKVE 320
Query: 501 SLSSATAAVLVNAIYFKGAWSSKFDERLT-SDRDFYVSKDKTIK 629
LSS + G S +RL SDR F ++IK
Sbjct: 321 RLSSTNGDAATGTVTRGGISSGVGIQRLDGSDRKFQELTIESIK 364
>At2g43210.2 68415.m05371 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 307 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 128
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 127 PG 122
G
Sbjct: 195 KG 196
>At2g43210.1 68415.m05370 UBX domain-containing protein contains
Pfam profile PF00789: UBX domain
Length = 531
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -3
Query: 307 SSTPLIDRRSRLLLANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLF 128
S TP+ S +L SV + ++ P ++S V PSE K+ +TEN + T
Sbjct: 138 SETPVSSASSVVLPPGSVPLDAAVASP---STASSVQPSETKSTVTSASTTENNDGTVAV 194
Query: 127 PG 122
G
Sbjct: 195 KG 196
>At2g32620.1 68415.m03982 cellulose synthase family protein similar
to Zea mays cellulose synthase-5 [gi:9622882], -4
[gi:9622880], -9 [gi:9622890]
Length = 757
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = -3
Query: 268 LANSVRIASSSGKPIAFKSSSWVSPSEAKAN*ARGGSTENAERTTLFPGLFFTTSVNILA 89
L+ +V + S P+ S S + PS+ + + G TE PG F VN+ A
Sbjct: 627 LSKNVFLVSKKTMPVETMSGSGIGPSQREDDGPNSGKTEFDGSLYFLPGTFIVL-VNLAA 685
Query: 88 V 86
+
Sbjct: 686 L 686
>At2g20210.1 68415.m02363 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 604
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/68 (25%), Positives = 32/68 (47%)
Frame = +3
Query: 57 NVLKNGNDNFTARMFTEVVKNNPGKSVVLSAFSVLPPLAQLALASDGETHEELLKAIGFP 236
N+ KN TAR ++++ P + ++++++PP A L L T + LK +
Sbjct: 503 NISKNRGGLETARFLSKLIPLAPKLISIDASYNLMPPEALLMLCDSLRTAKGDLKRLDMT 562
Query: 237 DDDAIRTE 260
+ I E
Sbjct: 563 GNSCISHE 570
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,738,899
Number of Sequences: 28952
Number of extensions: 269162
Number of successful extensions: 866
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 863
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -