Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0477
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   0.99 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    24   0.99 
EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic hor...    21   9.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   9.2  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 538 CSADRANIPAVAATASVPNSLTV 470
           CSAD   IP     A+VP  +T+
Sbjct: 167 CSADGTRIPGQLEPANVPQMITL 189


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 24.2 bits (50), Expect = 0.99
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 538 CSADRANIPAVAATASVPNSLTV 470
           CSAD   IP     A+VP  +T+
Sbjct: 174 CSADGTRIPGQLEPANVPQMITL 196


>EF222289-1|ABN79649.1|   68|Tribolium castaneum adipokinetic
           hormone 2 protein.
          Length = 68

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 478 LTVILTLCKTESTYTPGLGK 419
           L  I+ LC  +  +TP  GK
Sbjct: 10  LITIVGLCAAQLNFTPNWGK 29


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -2

Query: 520 NIPAVAATASVPNSLTVILTL 458
           N+P    T +VPN+  V+L L
Sbjct: 639 NLPPAKDTIAVPNNGYVVLRL 659


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,695
Number of Sequences: 336
Number of extensions: 2805
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)