Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0477
         (674 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.5  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   8.1  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 369 SRFGHEQSRMLKDALNSLPNPGVYVD 446
           SRFG E++RM+     SL  PGV V+
Sbjct: 354 SRFGEEKARMI--TTMSLLLPGVAVN 377


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +3

Query: 369 SRFGHEQSRMLKDALNSLPNPGVYVD 446
           SRFG E++RM+     SL  PGV V+
Sbjct: 354 SRFGEEKARMI--TTMSLLLPGVAVN 377


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 600 FSAVVYDPTI*KQFTTNKLLNNKC 671
           F+ VV + TI    +TN  L+ KC
Sbjct: 612 FNCVVVEETIPSLNSTNVTLSTKC 635


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,886
Number of Sequences: 438
Number of extensions: 3201
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)