Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0473
         (714 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0Q2I2 Cluster: Deoxyguanosinetriphosphate triphosphohy...    34   3.0  
UniRef50_Q19367 Cluster: Putative uncharacterized protein; n=1; ...    34   4.0  
UniRef50_UPI0000519E71 Cluster: PREDICTED: similar to CG17665-PA...    33   5.3  
UniRef50_Q8I3N4 Cluster: Putative uncharacterized protein PFE114...    33   5.3  
UniRef50_Q1VWI5 Cluster: Putative uncharacterized protein; n=1; ...    33   9.2  
UniRef50_A1FCA9 Cluster: Sulfatase; n=1; Pseudomonas putida W619...    33   9.2  

>UniRef50_A0Q2I2 Cluster: Deoxyguanosinetriphosphate
           triphosphohydrolase, putative; n=1; Clostridium novyi
           NT|Rep: Deoxyguanosinetriphosphate triphosphohydrolase,
           putative - Clostridium novyi (strain NT)
          Length = 562

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 17/45 (37%), Positives = 29/45 (64%)
 Frame = -1

Query: 540 LLFFVEDVSQTASRNICTITENDYNNKNSNGQRLLTHLQIV*FEY 406
           L FF++DV+ ++ +NI +ITE+D   KN    RL+   +++ F Y
Sbjct: 330 LNFFIQDVTISSLKNIGSITEDDVERKN---DRLIIKKKVIDFSY 371


>UniRef50_Q19367 Cluster: Putative uncharacterized protein; n=1;
           Caenorhabditis elegans|Rep: Putative uncharacterized
           protein - Caenorhabditis elegans
          Length = 667

 Score = 33.9 bits (74), Expect = 4.0
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 498 NICTITENDYNNKNSNGQRLLTHLQIV*FEYLKLEHH 388
           N+C++  +D N KN NG   L +LQI+    L  EHH
Sbjct: 191 NLCSLDISDANIKNLNGISHLKNLQILCIRNLDFEHH 227


>UniRef50_UPI0000519E71 Cluster: PREDICTED: similar to CG17665-PA.3
           isoform 1; n=3; Endopterygota|Rep: PREDICTED: similar to
           CG17665-PA.3 isoform 1 - Apis mellifera
          Length = 1035

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -3

Query: 448 PKAFDPSTNCIIRILKTRTSSLFLSEYYLTKEESKIFIMTNQ 323
           PK+  P+ N ++++L+TRTS  FL        E K+  +T+Q
Sbjct: 251 PKSLCPNFNGVLQLLQTRTSRRFLQSRLTPDMERKLVFLTSQ 292


>UniRef50_Q8I3N4 Cluster: Putative uncharacterized protein PFE1145w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE1145w - Plasmodium falciparum
           (isolate 3D7)
          Length = 1552

 Score = 33.5 bits (73), Expect = 5.3
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
 Frame = -1

Query: 588 K*NNVSKEIEK-VYINKLLFF--VEDVSQTASRNICTITENDYNNKNSN 451
           K  N + E  K VY N+ +F   ++++ Q    N C I +ND+NNKN N
Sbjct: 806 KKKNYNNEYNKNVYKNRKVFNMKIDNIRQKDEEN-CMINDNDFNNKNGN 853


>UniRef50_Q1VWI5 Cluster: Putative uncharacterized protein; n=1;
           Psychroflexus torquis ATCC 700755|Rep: Putative
           uncharacterized protein - Psychroflexus torquis ATCC
           700755
          Length = 76

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 20/45 (44%), Positives = 27/45 (60%)
 Frame = +1

Query: 451 VGIFVIIIILSNGTYVPRRGL*NIFYKKQQFVNVHFFYFLRNIVL 585
           V +FV III S   Y+  RGL N +YK   FV + FF F+  ++L
Sbjct: 14  VVVFVSIIIYS---YIKDRGLHNKYYKGSLFVLLGFFTFIILLIL 55


>UniRef50_A1FCA9 Cluster: Sulfatase; n=1; Pseudomonas putida
           W619|Rep: Sulfatase - Pseudomonas putida W619
          Length = 553

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 19/48 (39%), Positives = 32/48 (66%)
 Frame = +2

Query: 428 RWVKSLWPLEFLLL*SFSVMVHMFLDAVCETSSTKNNSLLMYTFSISL 571
           R  K+ WP+  LLL SF ++  +F+  + E + +K + L++YTF+ISL
Sbjct: 13  RVAKAEWPI--LLLWSF-LLSPLFVRLLAECNCSKTDLLVIYTFAISL 57


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,458,153
Number of Sequences: 1657284
Number of extensions: 13025131
Number of successful extensions: 32268
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32170
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)