Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0473
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   9.9  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.9  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 257 IVTYIMSIFVTECLIDKLHTGKLIRHNKNLAFFFC 361
           IVT + + FVT   + K+    L     N  FF+C
Sbjct: 76  IVTILGATFVTVLQLHKIFAKGLNVIEANRLFFYC 110


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 257 IVTYIMSIFVTECLIDKLHTGKLIRHNKNLAFFFC 361
           IVT + + FVT   + K+    L     N  FF+C
Sbjct: 76  IVTILGATFVTVLQLHKIFAKGLNVIEANRLFFYC 110


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +2

Query: 257 IVTYIMSIFVTECLIDKLHTGKLIRHNKNLAFFFC 361
           IVT + + FVT   + K+    L     N  FF+C
Sbjct: 76  IVTILGATFVTVLQLHKIFAKGLNVIEANRLFFYC 110


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 65  QMAESNYSASLSSCRFL 15
           Q   SN SAS  +C+FL
Sbjct: 163 QSTSSNNSASPKACQFL 179


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 65  QMAESNYSASLSSCRFL 15
           Q   SN SAS  +C+FL
Sbjct: 183 QSTSSNNSASPKACQFL 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,549
Number of Sequences: 336
Number of extensions: 4027
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)