Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0473
         (714 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764     30   1.6  
01_05_0553 + 23185473-23186188,23187096-23187101,23187230-231873...    30   2.1  
08_01_0053 + 365188-365376,365451-365729,365818-367341                 29   4.8  
01_05_0495 + 22705697-22705765,22705903-22706025,22708429-227085...    28   6.4  

>11_06_0496 - 24325587-24326143,24326658-24327495,24327612-24327764
          Length = 515

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 17/57 (29%), Positives = 23/57 (40%)
 Frame = -3

Query: 688 SSFELKLLEIRVLSCDFGFTSHWLHLQATSKNYQIKQCF*GNRKSVH*QTVVFCRRC 518
           + F+  +   R + CD    SHW H     +  QIK          H  TV FC+ C
Sbjct: 199 NGFDFDVNTCRWIGCDG--CSHWTHAGCAIREEQIKTVITVEDGVAHYVTVFFCKAC 253


>01_05_0553 + 23185473-23186188,23187096-23187101,23187230-23187374,
            23187887-23188159,23188275-23188338,23188479-23188744,
            23188951-23189045,23189544-23189718,23190669-23191063,
            23191830-23191953,23192864-23192959,23193049-23193120,
            23194687-23194824,23195369-23195549,23195602-23195963,
            23196944-23197386,23197461-23197763,23197857-23198081,
            23198260-23198350,23198702-23198779,23198939-23199229,
            23199316-23199513,23199681-23200163,23200488-23200562,
            23201163-23201324,23201400-23201729,23201816-23201916,
            23202477-23202581,23202931-23203162,23203913-23204257,
            23204346-23204447,23206010-23206153,23206463-23206551,
            23206979-23207061,23207172-23207287,23207824-23207909,
            23208461-23208560,23209270-23209335
          Length = 2451

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +1

Query: 523  FYKKQQFVNVHFFYFLRNIVLFDNSLTSLVSEAND 627
            F  K+QF+N +FFYF+R      N   ++V E +D
Sbjct: 897  FKGKRQFLNGNFFYFIRLSGKLHNVARAIVDEDSD 931


>08_01_0053 + 365188-365376,365451-365729,365818-367341
          Length = 663

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +3

Query: 444 FGRWNFCYYNHSQ*WYICSSTRFV--KHLLQKTTVC*CTLFLFP*KHCF 584
           FG W+ C+  HS    +  + RF+  K ++  T  C      +  KHCF
Sbjct: 285 FGVWHVCFSMHSSREELEQALRFIQPKWVISTTPPCMAIELSYVKKHCF 333


>01_05_0495 + 22705697-22705765,22705903-22706025,22708429-22708586,
            22709162-22709206,22709367-22709445,22709522-22709595,
            22709703-22709809,22711116-22711301,22711882-22711920,
            22712020-22712086,22712207-22712281,22713113-22713347,
            22713425-22713755,22714530-22714710,22714810-22714950,
            22715041-22715302,22715503-22715892,22717179-22717735,
            22718421-22718557,22718672-22718853,22718959-22719339,
            22719420-22719545,22719635-22719700,22720056-22721839,
            22721914-22722193,22722386-22722616,22723067-22723588,
            22723683-22723815,22723937-22724193
          Length = 2405

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
 Frame = -1

Query: 549  INKLLFFVEDVSQTASRNICTITENDYNNKNSNGQRLLTHLQIV*FEYLKLEHHHFSYPN 370
            ++ LL  V  + ++  RN+ ++ E DY +K SN       + +     + L+ H    P+
Sbjct: 790  LDVLLLIVVRLLESCMRNLRSMNEEDYPSKQSNDPDDECSMTLEAGNSMSLKEHSKDLPS 849

Query: 369  II*QKKKARFLL*RINLPVCS-LSIKHSVTNIDII--*VTIGSKKHLKFLC 226
                K     +   I L  C+ LS+   ++ + ++   V+I   K L+ LC
Sbjct: 850  ADHNKLSLLMMKLLIMLVKCNILSVVTPISYLTVMQESVSIKQLKDLRSLC 900


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,321,731
Number of Sequences: 37544
Number of extensions: 302401
Number of successful extensions: 459
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)