Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0473
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73425-4|CAA97786.1|  667|Caenorhabditis elegans Hypothetical pr...    34   0.12 
AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical...    29   2.5  
Z71265-1|CAA95832.1|  445|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical pr...    28   7.6  
AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z73425-4|CAA97786.1|  667|Caenorhabditis elegans Hypothetical
           protein F12F6.8 protein.
          Length = 667

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -1

Query: 498 NICTITENDYNNKNSNGQRLLTHLQIV*FEYLKLEHH 388
           N+C++  +D N KN NG   L +LQI+    L  EHH
Sbjct: 191 NLCSLDISDANIKNLNGISHLKNLQILCIRNLDFEHH 227


>AF016446-10|AAC24161.1| 1050|Caenorhabditis elegans Hypothetical
           protein C02E7.1 protein.
          Length = 1050

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = -1

Query: 600 QRIIK*NNVSKEIEKV-YINKLLFFVEDVSQTASRNICTITENDYNNKNSNGQ 445
           +R+ K N   K++EK+  +        D + T ++N  T+T+  YNN  ++G+
Sbjct: 353 RRMAKKNVFLKKLEKIDSVGATTLIASDKTGTLTKNCMTVTDLWYNNSYNSGR 405


>Z71265-1|CAA95832.1|  445|Caenorhabditis elegans Hypothetical
           protein M05B5.1 protein.
          Length = 445

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -1

Query: 186 KFIIDVK**TFRYYTKLNAITFLPSKYIYNEMETNL 79
           K+I+D+K  +   Y   N   + PSK  +NE E N+
Sbjct: 81  KYILDMKEASLNTYFDANLANYSPSKCTFNEWEKNV 116


>Z49966-5|CAA90245.1|  445|Caenorhabditis elegans Hypothetical
           protein F35C11.5 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 415 IRILKTRTSSLFLSEYYLTKEESKIFIMTNQFTCM*FVNQTFCHK 281
           ++  + R  S+FLS Y   K  S IF+  N F  + FV     +K
Sbjct: 25  VKTTEDRFHSIFLSAYKPNKFISSIFVCCNSFLLLNFVESFLFYK 69


>Z69646-7|CAA93471.3| 1484|Caenorhabditis elegans Hypothetical protein
            F57C7.4 protein.
          Length = 1484

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/72 (23%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
 Frame = -1

Query: 657  GY*VVISVLRVIGFTYKRRQRIIK*NNVSKEIE----KVYINKLLFFVEDVSQTASRNIC 490
            GY  +++++ V+ FTY    R +  ++ ++++       YINKL    +D ++  ++++ 
Sbjct: 1260 GYQKILNLITVLNFTYSVVNRELNGDSYARKLTFNFLNSYINKLSDDADDYAKKWAQSMA 1319

Query: 489  TITE-NDYNNKN 457
            T  + ++Y  KN
Sbjct: 1320 TTLQISEYRFKN 1331


>AL110479-3|CAB60312.2|  330|Caenorhabditis elegans Hypothetical
           protein Y105C5B.4 protein.
          Length = 330

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 84  LFPFHYKYIWKEEK*W 131
           +FP HY+ IWK  K W
Sbjct: 128 IFPEHYRKIWKSNKLW 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,928,960
Number of Sequences: 27780
Number of extensions: 340387
Number of successful extensions: 720
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)