SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0472
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    24   1.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   2.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.2  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    22   3.9  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    22   5.1  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    22   5.1  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    22   5.1  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    21   6.7  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   6.7  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   8.9  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   8.9  

>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 352 FVTYKLPNIRVSWQAVCNGDQSQIIRIYLSD 260
           F TY    + V W+    GD++  I + LSD
Sbjct: 130 FETYNFDGLDVDWEYPLEGDRANFITL-LSD 159


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 141 DPMLRVRWAQSSEFANTSPGKS 206
           D  +   W + + FAN SP K+
Sbjct: 54  DERITYSWTEINAFANVSPSKT 75


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/43 (27%), Positives = 21/43 (48%)
 Frame = +2

Query: 428 ERSRRDTDDEGSPATVELFSGLYVNEPDSLDNDDVISEKKEDE 556
           +R +  T D+   A  E+     V+E + L+N   +  K+E E
Sbjct: 847 KREKSPTSDKAQEADGEVVVKKEVDEEERLENHTSVKIKREAE 889


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 141 DPMLRVRWAQSSEFANTSPGKS 206
           D  +   W + + FAN SP K+
Sbjct: 54  DERITYSWTEINAFANVSPPKT 75


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 402 DTIWTLEIVKKKKLHACS*HTNCQIFG 322
           D +  L+ V++  +H C    N  IFG
Sbjct: 164 DMVMALKWVQENVIHFCGDPNNVTIFG 190


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 402 DTIWTLEIVKKKKLHACS*HTNCQIFG 322
           D +  L+ V++  +H C    N  IFG
Sbjct: 164 DMVMALKWVQENVIHFCGDPNNVTIFG 190


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 402 DTIWTLEIVKKKKLHACS*HTNCQIFG 322
           D +  L+ V++  +H C    N  IFG
Sbjct: 163 DMVMALKWVQENVIHFCGDPNNVTIFG 189


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +2

Query: 506 PDSLDNDDVISEKK 547
           PD++D DD++S ++
Sbjct: 23  PDNIDIDDILSNER 36


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 437 RRDTDDEGSPATVELFSGLYVN 502
           R+DT D   P+ +E F   YV+
Sbjct: 134 RQDTQDIDLPSFIESFPDKYVD 155


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/10 (60%), Positives = 6/10 (60%)
 Frame = +2

Query: 320 NPNIWQFVCH 349
           NP  W F CH
Sbjct: 663 NPGFWLFHCH 672


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -3

Query: 243 GHSYSAIDPAKH 208
           GH++   DPA+H
Sbjct: 261 GHTFQLADPAQH 272


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 402 DTIWTLEIVKKKKLHACS*HTNCQIFG 322
           D +  L+ V++  +H C    N  IFG
Sbjct: 164 DMVLALKWVQENIIHFCGDPNNVTIFG 190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,651
Number of Sequences: 336
Number of extensions: 3562
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -