Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0472
         (656 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034983-1|AAH34983.1|  995|Homo sapiens GTPase activating Rap/R...    34   0.39 
AL450263-4|CAI41459.1|  995|Homo sapiens GTPase activating Rap/R...    34   0.39 
AL445222-13|CAH72927.1|  995|Homo sapiens GTPase activating Rap/...    34   0.39 

>BC034983-1|AAH34983.1|  995|Homo sapiens GTPase activating
           Rap/RanGAP domain-like 3 protein.
          Length = 995

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 22/62 (35%), Positives = 29/62 (46%)
 Frame = +2

Query: 140 RSDAPSSLGSVK*IRKH*PWEEQCFAGSIAE*EWPLTGAEVA*VDSDDLGLIAIADRLPR 319
           R DAPSSL +    +K  PWE QCF  +             A + S D G++ + D LP 
Sbjct: 443 RGDAPSSLAASGICKKE-PWEPQCFCSNFPHEAVCADPWGQALLVSTDAGVLLVDDDLPS 501

Query: 320 NP 325
            P
Sbjct: 502 VP 503


>AL450263-4|CAI41459.1|  995|Homo sapiens GTPase activating
           Rap/RanGAP domain-like 3 protein.
          Length = 995

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 22/62 (35%), Positives = 29/62 (46%)
 Frame = +2

Query: 140 RSDAPSSLGSVK*IRKH*PWEEQCFAGSIAE*EWPLTGAEVA*VDSDDLGLIAIADRLPR 319
           R DAPSSL +    +K  PWE QCF  +             A + S D G++ + D LP 
Sbjct: 443 RGDAPSSLAASGICKKE-PWEPQCFCSNFPHEAVCADPWGQALLVSTDAGVLLVDDDLPS 501

Query: 320 NP 325
            P
Sbjct: 502 VP 503


>AL445222-13|CAH72927.1|  995|Homo sapiens GTPase activating
           Rap/RanGAP domain-like 3 protein.
          Length = 995

 Score = 34.3 bits (75), Expect = 0.39
 Identities = 22/62 (35%), Positives = 29/62 (46%)
 Frame = +2

Query: 140 RSDAPSSLGSVK*IRKH*PWEEQCFAGSIAE*EWPLTGAEVA*VDSDDLGLIAIADRLPR 319
           R DAPSSL +    +K  PWE QCF  +             A + S D G++ + D LP 
Sbjct: 443 RGDAPSSLAASGICKKE-PWEPQCFCSNFPHEAVCADPWGQALLVSTDAGVLLVDDDLPS 501

Query: 320 NP 325
            P
Sbjct: 502 VP 503


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,227,969
Number of Sequences: 237096
Number of extensions: 2010412
Number of successful extensions: 4299
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4299
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)