Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NRPG0468
         (534 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     24   0.73 
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   5.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.8  
AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    21   6.8  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.8  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    21   6.8  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 24.2 bits (50), Expect = 0.73
 Identities = 12/48 (25%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
 Frame = +1

Query: 220 EPSYDTAPLKAENIEVRDLAYD-DGTF---PPANVVDDWFEILRDKAE 351
           EP+YD +  + + +   +   + D +F   P  + +D+W + L++KA+
Sbjct: 378 EPTYDNSRREGKQLNPLNKGTEADSSFVTLPQLHSLDEWDDTLKEKAD 425


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 534 RSVLLQVRELLSVDGASTL 478
           RS+ LQ++E L   G S L
Sbjct: 112 RSIYLQIKERLKTQGISHL 130


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -1

Query: 342  ISEDLEPVVYDVGWREGPVVVGEVAHLD 259
            +S+  + V+ +  + +GP++ GEV +L+
Sbjct: 1162 VSQPSDEVMENSWFYDGPLIRGEVHYLN 1189


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = -1

Query: 342  ISEDLEPVVYDVGWREGPVVVGEVAHLD 259
            +S+  + V+ +  + +GP++ GEV +L+
Sbjct: 1162 VSQPSDEVMENSWFYDGPLIRGEVHYLN 1189


>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = +1

Query: 445 KYEEAVETIRDQRRGAINAKQLSYLEKYR 531
           KY++AVE +  +++     ++   L++Y+
Sbjct: 46  KYQKAVEKLLTEQKELAEKEEAETLKRYK 74


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = +1

Query: 445 KYEEAVETIRDQRRGAINAKQLSYLEKYR 531
           KY++AVE +  +++     ++   L++Y+
Sbjct: 206 KYQKAVEKLLTEQKELAEKEEAETLKRYK 234


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = +1

Query: 445 KYEEAVETIRDQRRGAINAKQLSYLEKYR 531
           KY++AVE +  +++     ++   L++Y+
Sbjct: 206 KYQKAVEKLLTEQKELAEKEEAETLKRYK 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,349
Number of Sequences: 336
Number of extensions: 1691
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)