Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0468
(534 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38013| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 7e-08
SB_36904| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_1177| Best HMM Match : PEARLI-4 (HMM E-Value=0.46) 44 6e-05
SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29) 34 0.063
SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.34
SB_53570| Best HMM Match : Y_phosphatase (HMM E-Value=0) 32 0.34
SB_30129| Best HMM Match : Y_phosphatase (HMM E-Value=6.7e-13) 31 0.59
SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09) 31 0.78
SB_10701| Best HMM Match : DSPc (HMM E-Value=0) 31 0.78
SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0) 30 1.0
SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0) 29 1.8
SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1) 29 3.2
SB_30028| Best HMM Match : Cu_amine_oxidN3 (HMM E-Value=1.5) 28 5.5
SB_12732| Best HMM Match : Y_phosphatase (HMM E-Value=0) 28 5.5
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022) 28 5.5
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 28 5.5
SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0) 27 7.3
SB_12334| Best HMM Match : 7tm_1 (HMM E-Value=0.35) 27 7.3
SB_53162| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_48208| Best HMM Match : rve (HMM E-Value=2e-20) 27 9.6
SB_44472| Best HMM Match : Y_phosphatase (HMM E-Value=0) 27 9.6
SB_23023| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6
>SB_38013| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 54.0 bits (124), Expect = 7e-08
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 15/74 (20%)
Frame = +1
Query: 91 PAPSLIEYKGMRFLITDRPSDVSIQAY---------------LQELRKHNFCTVVRVCEP 225
P ++EYK M+FLITDRP++ ++ Y +Q+L+K++ TVVRVCEP
Sbjct: 14 PGAVMLEYKSMKFLITDRPTNSTLPQYIQYLERFKRLFVNSSIQDLKKYDAHTVVRVCEP 73
Query: 226 SYDTAPLKAENIEV 267
+Y+T L E I V
Sbjct: 74 TYNTETLSKEGIIV 87
>SB_36904| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 47.6 bits (108), Expect = 6e-06
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Frame = +1
Query: 229 YDTAPLKAENIEVRDLAYDDGTFPPANVVDDWFEILRDKAENKPESAVAVHCVAGLGRAP 408
YD A D ++DG P +V + IL + E AVA+HC AGLGR
Sbjct: 197 YDARCFTANGFAHSDQYFEDGGIPTKAIVKRFTRIL-----DHCEGAVAIHCRAGLGRTG 251
Query: 409 VMVAIALI-ELGMKYEEAVETIRDQRRGAINAKQLSYLE 522
++A LI + EAV +R R G++++ Q +LE
Sbjct: 252 TLIACYLIKQYKFSAAEAVGWLRICRPGSVSSLQHCFLE 290
>SB_1177| Best HMM Match : PEARLI-4 (HMM E-Value=0.46)
Length = 576
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/74 (35%), Positives = 38/74 (51%)
Frame = +1
Query: 163 QAYLQELRKHNFCTVVRVCEPSYDTAPLKAENIEVRDLAYDDGTFPPANVVDDWFEILRD 342
+AY+ +KHN TVVR+ + YD IE DL + DG+ P +V + I
Sbjct: 203 EAYIPYFKKHNISTVVRLNKKLYDAQRFTDHGIEHYDLFFIDGSVPSDMIVRRFLTI--- 259
Query: 343 KAENKPESAVAVHC 384
AEN + +A+HC
Sbjct: 260 -AEN-AKGGIAIHC 271
>SB_11234| Best HMM Match : DSPc (HMM E-Value=2.4e-29)
Length = 2072
Score = 34.3 bits (75), Expect = 0.063
Identities = 18/64 (28%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Frame = +1
Query: 301 PANVVDDWFEILRDKAEN--KPESAVAVHCVAGLGR-APVMVAIALIELGMKYEEAVETI 471
P N + +F+++ DK E+ + V VHC+AG+ R A +++A + + +A + +
Sbjct: 47 PGNKIGIFFDMVSDKIESVRRVGGKVLVHCIAGVSRSASLVIAYLMKYQRLNLRDAHKLV 106
Query: 472 RDQR 483
+D+R
Sbjct: 107 QDKR 110
>SB_41282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 33.1 bits (72), Expect = 0.15
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +1
Query: 280 YDDGTFPPANVVDDWFEILRDKAENKPESAVAVHCVAGLGRAPVMVAIALIELG--MKYE 453
+DD PP ++ + + + + + + +HC AG GR VM+ L+ G +
Sbjct: 32 FDDHNAPPFELIKPFCDDVDEWLKASNLNVAIIHCKAGKGRTGVMICAYLLHNGHFKDTK 91
Query: 454 EAVETIRDQR----RGAINAKQLSYLEKY 528
EA+E + R +G Q Y+E Y
Sbjct: 92 EAMEYYGNARTRNAKGVTIPSQRRYVEYY 120
>SB_54054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4232
Score = 31.9 bits (69), Expect = 0.34
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Frame = +1
Query: 373 AVHCVAGLGRAPVMVAIALIELGMKYE------EAVETIRDQRRGAINAK 504
AVHC AG+GR V A++++ +K E + V+ +R+QR + K
Sbjct: 3617 AVHCSAGVGRTGVFCAVSILIERLKAEAMVDVFQTVKQLREQRPAMVQTK 3666
>SB_53570| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 2064
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 310 VVDDWFEILRDKAENKPESAVAVHCVAGLGRAPVMVAIALIELGMKYE------EAVETI 471
++D ++ R + + E + VHC G+GR V A+ ++ M+ E + V+ +
Sbjct: 1963 IIDLIGQVQRAYEQQEEEGPITVHCSDGVGRTGVFTALFIVLERMRSEGVVDLFQTVKLL 2022
Query: 472 RDQRRGAINAKQL 510
R QR + ++ L
Sbjct: 2023 RTQRPAMVQSQML 2035
Score = 30.7 bits (66), Expect = 0.78
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +1
Query: 337 RDKAENKPESA-VAVHCVAGLGRAPVMVAIALIELGMKYEEAVE 465
R K N P++ + VHC AG+GR + I + +++EE V+
Sbjct: 1680 RVKFYNPPDAGPIVVHCSAGVGRTGCFIVIDSMLERLRHEETVD 1723
>SB_30129| Best HMM Match : Y_phosphatase (HMM E-Value=6.7e-13)
Length = 139
Score = 31.1 bits (67), Expect = 0.59
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Frame = +1
Query: 370 VAVHCVAGLGRAPVMVAIALIELGMKYE------EAVETIRDQRRGAINAK 504
+ VHC AG+GR V A++++ +K E + V+ +R+QR + K
Sbjct: 89 IIVHCSAGVGRTGVFCAVSILIERLKAEAMVDVFQTVKQLREQRPAMVQTK 139
>SB_12537| Best HMM Match : DSPc (HMM E-Value=1.3e-09)
Length = 195
Score = 30.7 bits (66), Expect = 0.78
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Frame = +1
Query: 262 EVRDLAYDDGTFPPANVVDDWFEILRDKAENKPESAVAVHCVAGLGRAPVMVAIALIE-L 438
++R D G P + + + + + ++ +K +S V VHC AG GR+ +VA L++ +
Sbjct: 97 QLRLATVDFGNAPSLDNLSEGVKFI-EEIRSKGDS-VYVHCKAGRGRSATLVACYLMKNM 154
Query: 439 GMKYEEAVETIRDQR 483
+ EEA I+ +R
Sbjct: 155 ALNPEEAHLFIKSKR 169
>SB_10701| Best HMM Match : DSPc (HMM E-Value=0)
Length = 365
Score = 30.7 bits (66), Expect = 0.78
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 322 WFEILRDKAENKPESA--VAVHCVAGLGR-APVMVAIALIELGMKYEEAVETIRDQR 483
WFE ++ S V VHC AG+ R A + +A + L + +EA E ++ +R
Sbjct: 241 WFEEAAGFIDSVKASGGRVLVHCQAGISRSATICLAYLISRLNFRLDEAYEYVKKRR 297
>SB_28559| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 893
Score = 30.3 bits (65), Expect = 1.0
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Frame = +1
Query: 199 CTVVRVCEPSY--------DTAPLKAENI-EVRDLAYDDGTFPP-ANVVDDWFEILRDKA 348
C +R PSY DT L++ I +++ LA+ D P A ++ +R
Sbjct: 530 CNKIRDFSPSYVYREMYVTDTTTLRSRVIIQLQYLAWPDHDVPDDATDFLEFVHSVRHYR 589
Query: 349 ENKPESAVAVHCVAGLGRAPVMV----AIALIELGMKYE--EAVETIRDQRRGAI 495
E AV VHC AG+GR+ V++ A +IE E V +RDQR I
Sbjct: 590 EGTSTPAV-VHCSAGVGRSGVLMFIETAFGMIEGAEPVYPLELVRRMRDQRGSLI 643
>SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 734
Score = 29.5 bits (63), Expect = 1.8
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 12/135 (8%)
Frame = +1
Query: 127 FLITDRPSDVSIQAYLQELRKHNFCTVVRVCEPSYDTAPLKAENIEVRDLAYDDGTFPPA 306
F++T P + +I ++ + + ++ T+V + S D K ++ R + +
Sbjct: 573 FILTQAPLEDTIASFWRMVVDYDLGTIVML--NSLDEEDEKGKSTPQRICHFQVTNWSDH 630
Query: 307 NVVD---DWFEILRDKAENKPES---AVAVHCVAGLGRAPVMVAIALIELGMKYE----- 453
+V D D +L D ++ +S ++ V C G+GR+ + AI + +K E
Sbjct: 631 SVPDKPLDLLPLLNDIQTSQQKSGDKSIVVQCSDGVGRSGTLCAIMSVIERVKVEHVVDV 690
Query: 454 -EAVETIRDQRRGAI 495
+AV+ +R R GA+
Sbjct: 691 FQAVKNLRISRPGAV 705
>SB_30668| Best HMM Match : NIF3 (HMM E-Value=5.1)
Length = 1318
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +1
Query: 304 ANVVDDWFEILRDKAENKPESAVAVHCVAGLGRAPVMVAIALIELGMKYEEAVETIRDQR 483
+N+V +W+EI D +A G+ R A L LG ++A T+ Q
Sbjct: 258 SNIVHEWYEIKLDDFVRPEWVDIATSLKKGIDRFNESRATTLRHLGQTVKDATVTLNQQN 317
Query: 484 R 486
+
Sbjct: 318 K 318
>SB_30028| Best HMM Match : Cu_amine_oxidN3 (HMM E-Value=1.5)
Length = 172
Score = 27.9 bits (59), Expect = 5.5
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 172 LQELRKHNFCTVVRVCEPSYDTAPLKAENIEVRDLAYD-DGTFPPANVVDDWFEILRD-K 345
L+E+ +F TV+ V PS+ P++ +E+ L G P VV + +R+
Sbjct: 9 LREIEIPDFPTVIPVPLPSWKPVPVEDRQVELEGLIKPRSGKTTPLEVVQRILDAMREFD 68
Query: 346 AENKPESAV 372
A N P A+
Sbjct: 69 AMNPPLLAI 77
>SB_12732| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 800
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 319 DWFEILRDKAENKPESAVAVHCVAGLGRAPVMVAIALIELGMKYEEAVETIR 474
D + +D+ + K V VHC AG+GR VA ++ ++ E V+ ++
Sbjct: 498 DEVHLAQDRDDGKT-GPVVVHCSAGIGRTGCFVATSIGIKQIQKENKVDILK 548
>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
Length = 1514
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 304 ANVVDDWFEILRDKAENKPESAVAVHCVAGLGRAPVMVAIALIELGMKYEEAVETIRDQR 483
+N+V +W+EI D +A G+ R A L LG ++A T+ ++
Sbjct: 336 SNIVHEWYEIKLDDFVRPEWVDIATSLKKGIDRFNESRAATLRHLGQTVKDATVTLNEKN 395
Query: 484 R 486
+
Sbjct: 396 K 396
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 171 IRLNGHVRWA-VGDEEAHPLVLDEGRRRSNVLLLHGHRCFSSAGR 40
IR+ G +R A +G E HP++L S +++ H H+ GR
Sbjct: 1177 IRVGGRLRRADLGYIERHPVLLPNDHHLSKLIVRHFHQRVKHQGR 1221
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 27.9 bits (59), Expect = 5.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -1
Query: 171 IRLNGHVRWA-VGDEEAHPLVLDEGRRRSNVLLLHGHRCFSSAGR 40
IR+ G +R A +G E HP++L S +++ H H+ GR
Sbjct: 450 IRVRGRLRRADLGYIERHPVLLPNDHHLSKLIVRHFHQRVKHQGR 494
>SB_22355| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 1252
Score = 27.5 bits (58), Expect = 7.3
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = +1
Query: 364 SAVAVHCVAGLGRAPVMVAIALIELGMKYEEAVETIR 474
+ + VHC G+GR V A++++ +K E ++ +
Sbjct: 1146 TCITVHCSGGVGRTGVFCAVSILIERVKAEGLIDVFQ 1182
>SB_12334| Best HMM Match : 7tm_1 (HMM E-Value=0.35)
Length = 311
Score = 27.5 bits (58), Expect = 7.3
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 RPAPSLIEYKGMRFLITDRPSDVSIQAYLQELRKH-NFCTVVRVCEPSYD 234
+ A S I+Y F +RP S + +Q L K C VC P D
Sbjct: 199 KSASSSIQYSNKSFTSNERPLSTSASSSIQHLNKSLTNCDQDNVCCPHQD 248
>SB_53162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 962
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +3
Query: 114 QGDALPHHRPPIGRVHSGVSAGVEEAQLLHGGARVRAELRHGAAEG 251
Q + L H++ P+G VH GV + QL++ +++ G +G
Sbjct: 431 QTEGLIHNKMPVGNVHEGVGS----EQLVNSNGAIKSHPYVGKVDG 472
>SB_48208| Best HMM Match : rve (HMM E-Value=2e-20)
Length = 1557
Score = 27.1 bits (57), Expect = 9.6
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +1
Query: 304 ANVVDDWFEILRDKAENKPESAVAVHCVAGLGRAPVMVAIALIELGMKYEEAVETIRDQ 480
+N+V +W+EI D +A G+ R A L LG ++A T+ ++
Sbjct: 465 SNIVHEWYEIKLDDFVRPEWVDIATSLKKGIDRFNESRAATLRHLGQTLKDATVTLNEK 523
>SB_44472| Best HMM Match : Y_phosphatase (HMM E-Value=0)
Length = 206
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 349 ENKPESAVAVHCVAGLGRAPVMVAIALI 432
E+KP V VHC AG+GR V++ L+
Sbjct: 131 ESKPP--VLVHCTAGVGRTGVIILTDLM 156
>SB_23023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 505
Score = 27.1 bits (57), Expect = 9.6
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 386 TQCTATADSGLFSALSLRISNQSST 312
+ C DSGL S LS IS QSS+
Sbjct: 7 SSCMTPTDSGLGSTLSFPISTQSSS 31
>SB_402| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 730
Score = 27.1 bits (57), Expect = 9.6
Identities = 22/83 (26%), Positives = 38/83 (45%)
Frame = +1
Query: 145 PSDVSIQAYLQELRKHNFCTVVRVCEPSYDTAPLKAENIEVRDLAYDDGTFPPANVVDDW 324
P ++ + E+R ++ V + CE S+ A ++ E D D G+ DDW
Sbjct: 435 PKPTQSRSIVGEMR-NDLMAVKQECE-SWQNAAESRKDAEQEDA--DSGSDYDDWNNDDW 490
Query: 325 FEILRDKAENKPESAVAVHCVAG 393
I DK ++KP+++ AG
Sbjct: 491 STITSDKPQDKPDTSSTYSNKAG 513
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,628,154
Number of Sequences: 59808
Number of extensions: 248029
Number of successful extensions: 723
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1203486867
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -