Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0468
(534 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g39400.1 68418.m04773 pollen specific phosphatase, putative /... 47 7e-06
At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1 GI... 37 0.007
At3g19420.1 68416.m02463 expressed protein 37 0.007
At2g04550.3 68415.m00462 dual specificity protein phosphatase fa... 31 0.37
At2g04550.2 68415.m00461 dual specificity protein phosphatase fa... 31 0.37
At2g04550.1 68415.m00463 dual specificity protein phosphatase fa... 31 0.37
At5g49270.1 68418.m06098 phytochelatin synthetase-related contai... 31 0.64
At3g10940.1 68416.m01319 protein phosphatase-related similar to ... 30 0.84
At5g42490.1 68418.m05172 kinesin motor family protein contains P... 30 1.1
At3g59550.1 68416.m06646 cohesion family protein SYN3 (SYN3) nea... 30 1.1
At3g52180.1 68416.m05729 protein tyrosine phosphatase/kinase int... 30 1.1
At5g56610.1 68418.m07068 dual specificity protein phosphatase fa... 28 3.4
At5g45570.1 68418.m05596 Ulp1 protease family protein contains P... 28 4.5
At5g28235.1 68418.m03421 Ulp1 protease family protein contains P... 28 4.5
At4g08430.1 68417.m01392 Ulp1 protease family protein similar to... 28 4.5
At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor, pu... 28 4.5
At3g56370.1 68416.m06269 leucine-rich repeat transmembrane prote... 27 5.9
At3g61260.1 68416.m06856 DNA-binding family protein / remorin fa... 27 7.9
At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquino... 27 7.9
>At5g39400.1 68418.m04773 pollen specific phosphatase, putative /
phosphatase and tensin, putative (PTEN1) identical to
phosphatase and tensin homolog [Arabidopsis thaliana]
GI:21535746
Length = 412
Score = 47.2 bits (107), Expect = 7e-06
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Frame = +1
Query: 178 ELRKHNFCTVVRVC-EPSYDTAPLKAENIEVRDLAYDDGTFPPANVVDDWFEILRDKAEN 354
++R + V +C E SYD V +DD P ++ + E +
Sbjct: 86 DMRHPDHYKVYNLCIEESYDPDNFYGR---VERFPFDDNHVPSLKMIQLFCESVHSWLSL 142
Query: 355 KPESAVAVHCVAGLGRAPVMVAIALIELGMKYEEAVETIRDQRRGAINAKQLSYLEKY 528
P++ VHC+AG GR +MV+ L+ GM EEA+E +R N + +Y
Sbjct: 143 DPKNIAVVHCMAGKGRTGLMVSAYLVYGGMSAEEALEMYASRRTTNNNGVSIPSQRRY 200
>At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1
GI:5566292 from [Drosophila melanogaster]; contains
prosite evidence: PS00383: Tyrosine specific protein
phosphatases active site
Length = 632
Score = 37.1 bits (82), Expect = 0.007
Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Frame = +1
Query: 205 VVRVC-EPSYDTAPLKAENIEVRDLAYDDGTFPPANVVDDWFEILRDKAENKPESAVAVH 381
V +C E YD + + + V +DD PP ++ + + + ++ V VH
Sbjct: 250 VYNLCSERLYDASRFEGK---VASFPFDDHNCPPIQLIPSFCQSAYTWLKEDIQNVVVVH 306
Query: 382 CVAGLGRAPVMVAIALIELGM--KYEEAVETIRDQR----RGAINAKQLSYLEKY 528
C AG+ R +M+ L+ L EEA++ +R + + Q+ Y++ Y
Sbjct: 307 CKAGMARTGLMICCLLLYLKFFPTAEEAIDYYNQKRCLDGKALVLPSQIRYVKYY 361
>At3g19420.1 68416.m02463 expressed protein
Length = 611
Score = 37.1 bits (82), Expect = 0.007
Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 6/95 (6%)
Frame = +1
Query: 262 EVRDLAYDDGTFPPANVVDDWFEILRDKAENKPESAVAVHCVAGLGRAPVMVAIALIELG 441
+V +DD PP ++V + + + E+ V VHC AG+ R +M+ L+ L
Sbjct: 223 KVASFPFDDHNCPPIHLVTSFCQSAYSWLKEDIENVVVVHCKAGMARTGLMICSLLLYLK 282
Query: 442 M--KYEEAVETIRDQR----RGAINAKQLSYLEKY 528
EE ++ +R +G + Q+ Y++ +
Sbjct: 283 FFPTAEECMDFYNQKRCVDGKGLVLPSQIRYVKYF 317
>At2g04550.3 68415.m00462 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain
Length = 188
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 316 DDWFEILRDKAENKPESAVAVHCVAGLGRAP-VMVAIALIELGMKYEEAVETIRDQR 483
DD + L D+ E K ++ V VHC++G R+P V+VA + G + E+ + ++ +R
Sbjct: 109 DDAIKFL-DQCE-KDKARVLVHCMSGKSRSPAVVVAYLMKRKGWRLAESHQWVKQRR 163
>At2g04550.2 68415.m00461 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain
Length = 180
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 316 DDWFEILRDKAENKPESAVAVHCVAGLGRAP-VMVAIALIELGMKYEEAVETIRDQR 483
DD + L D+ E K ++ V VHC++G R+P V+VA + G + E+ + ++ +R
Sbjct: 109 DDAIKFL-DQCE-KDKARVLVHCMSGKSRSPAVVVAYLMKRKGWRLAESHQWVKQRR 163
>At2g04550.1 68415.m00463 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain
Length = 257
Score = 31.5 bits (68), Expect = 0.37
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 316 DDWFEILRDKAENKPESAVAVHCVAGLGRAP-VMVAIALIELGMKYEEAVETIRDQR 483
DD + L D+ E K ++ V VHC++G R+P V+VA + G + E+ + ++ +R
Sbjct: 109 DDAIKFL-DQCE-KDKARVLVHCMSGKSRSPAVVVAYLMKRKGWRLAESHQWVKQRR 163
>At5g49270.1 68418.m06098 phytochelatin synthetase-related contains
Pfam PF04833: Phytochelatin synthetase-like conserved
region
Length = 663
Score = 30.7 bits (66), Expect = 0.64
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -1
Query: 507 LLSVDGA--STLIPDGLDGLFVLHAELDERD 421
LLSVDG +T+ +GL GL L AE DE+D
Sbjct: 553 LLSVDGGVNNTIFMEGLPGLDYLVAEADEKD 583
>At3g10940.1 68416.m01319 protein phosphatase-related similar to
protein phosphatase PTPKIS1 protein (GI:11595504)
[Arabidopsis thaliana]
Length = 282
Score = 30.3 bits (65), Expect = 0.84
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 346 AENKPESAVAVHCVAGLGRAP-VMVAIALIELGMKYEEAVETIRDQR 483
A ++ + V VHC AGLGRAP V +A M A +T+ +R
Sbjct: 181 AVSEGKGRVYVHCSAGLGRAPGVSIAYMYWFCDMNLNTAYDTLVSKR 227
>At5g42490.1 68418.m05172 kinesin motor family protein contains Pfam
domain, PF00225: Kinesin motor domain
Length = 1087
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +1
Query: 253 ENIEVRDLAYDDGT--FPPANVVDDWFEILRDKAENKPESAVAVHCV 387
EN E D DD T F N+ DDW E+++ E ++ V C+
Sbjct: 342 ENSEEDDFLLDDKTPQFSRHNLYDDWEELVQITDERLEDACKEVRCI 388
>At3g59550.1 68416.m06646 cohesion family protein SYN3 (SYN3) nearly
identical to cohesion family protein SYN3 [Arabidopsis
thaliana] GI:12006362; supporting cDNA
gi|12006361|gb|AF281155.1|AF281155
Length = 693
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +1
Query: 220 EPSYDTAPLKAENIEVRD--LAYDDGTFPPANVVDDWFEILRDKAENKPESAV 372
E +++T P +N E RD +A+D GT+ P NV +++ E+ + N E +
Sbjct: 188 ETAHETGP---DN-EPRDSNIAFDTGTYSPRNVTEEFTEVQDPRQSNLTEERI 236
>At3g52180.1 68416.m05729 protein tyrosine phosphatase/kinase
interaction sequence protein (PTPKIS1) identical to
PTPKIS1 protein [Arabidopsis thaliana] GI:11595504;
contains Pfam profile PF00782: Dual specificity
phosphatase, catalytic domain
Length = 379
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 343 KAENKPESAVAVHCVAGLGRAPVMVAIALIEL-GMKYEEAVETIRDQR 483
KA + VHC AG+GRAP + + + G K EA + + +R
Sbjct: 185 KAVKRNGGVTYVHCTAGMGRAPAVALTYMFWVQGYKLMEAHKLLMSKR 232
>At5g56610.1 68418.m07068 dual specificity protein phosphatase
family protein contains Pfam profile: PF00782 dual
specificity phosphatase, catalytic domain
Length = 228
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +1
Query: 376 VHCVAGLGRAPVMVAIALIE-LGMKYEEAVETIRDQR-RGAINAKQLSYLEKY 528
VHC AG GR+ +V LIE M A E +R R R ++ Q +E++
Sbjct: 155 VHCKAGRGRSTTVVLCYLIEHKSMTVAAAFEHVRSIRPRVLLHPSQRKVVEEF 207
>At5g45570.1 68418.m05596 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At4g08430, At5g28235
Length = 921
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 130 LITDRPSDVSIQAYLQELRKHNFCTVVRVCEPSYDTAPLKAENIEVR 270
+ITD PS S+ +LQ + F + EP ++ L N R
Sbjct: 621 IITDVPSSSSVPEHLQPVSDDQFDRLKDWLEPDFEKEGLNTNNFNAR 667
>At5g28235.1 68418.m03421 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; simlar to At4g08430, At5g45570
Length = 568
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 130 LITDRPSDVSIQAYLQELRKHNFCTVVRVCEPSYDTAPLKAENIEVR 270
+ITD PS S+ +LQ + F + EP ++ L N R
Sbjct: 344 IITDVPSSSSVPEHLQPVSDDQFDRLKDWLEPDFEKEGLNTNNFNAR 390
>At4g08430.1 68417.m01392 Ulp1 protease family protein similar to
At5g45570, At5g28235; contains Pfam profile PF02902:
Ulp1 protease family, C-terminal catalytic domain
Length = 808
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 130 LITDRPSDVSIQAYLQELRKHNFCTVVRVCEPSYDTAPLKAENIEVR 270
+ITD PS S+ +LQ + F + EP ++ L N R
Sbjct: 508 IITDVPSSSSVTEHLQPVSDDQFDRLKDWLEPDFEKEGLNTSNFNAR 554
>At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor,
putative (AVDE1) similar to EST gb|N37612
Length = 462
Score = 27.9 bits (59), Expect = 4.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 316 DDWFEILRDKAENKPESAVAVH 381
DDW+ IL K ENKPE + V+
Sbjct: 290 DDWY-ILSSKIENKPEDYIFVY 310
>At3g56370.1 68416.m06269 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich receptor-like protein
kinase - Malus domestica, EMBL:AF053127
Length = 964
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +1
Query: 301 PANVVDDWFEILRDKAENKPESAVAVHCVAGL--GRAPVMVAIALIELGMKYEEAVETIR 474
P ++D +L D E A C+ G+ PV A+A+I+LG+ V + R
Sbjct: 879 PVEYMEDDVVVLCDMVREALEDGRADECIDPRLQGKFPVEEAVAVIKLGLICTSQVPSSR 938
Query: 475 DQRRGAIN 498
A+N
Sbjct: 939 PHMGEAVN 946
>At3g61260.1 68416.m06856 DNA-binding family protein / remorin
family protein similar to DNA-binding protein gi|601843
[Arabidopsis thaliana], remorin [Solanum tuberosum]
GI:1881585; contains Pfam profiles PF03763: Remorin
C-terminal region, PF03766: Remorin N-terminal region
Length = 212
Score = 27.1 bits (57), Expect = 7.9
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%)
Frame = +1
Query: 220 EPSYDTAPLKAENIEV-RDLAYDD-GTFPPANVVDDWFEILRDKAENKPESAVA-VHCVA 390
+P + AP K + + RD+ D + V W E + KAENK E +A VH
Sbjct: 74 KPVEEPAPAKPASASLDRDVKLADLSKEKRLSFVRAWEESEKSKAENKAEKKIADVHAWE 133
Query: 391 GLGRAPVMVAIALIELGMKYEEA 459
+A V + IE ++ ++A
Sbjct: 134 NSKKAAVEAQLKKIEEQLEKKKA 156
>At2g43400.1 68415.m05394 electron transfer flavoprotein-ubiquinone
oxidoreductase family protein contains Pfam profile:
PF05187 Electron transfer flavoprotein-ubiquinone
oxidoreductase
Length = 633
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3
Query: 202 CKSCASSTPADTPEWTRPMGG 140
CK+C P EWT P GG
Sbjct: 605 CKACDIKDPKQNIEWTVPEGG 625
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,402,472
Number of Sequences: 28952
Number of extensions: 171561
Number of successful extensions: 536
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 984125600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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