Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= NRPG0467
(660 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 446 e-126
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 446 e-126
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 445 e-125
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 445 e-125
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 445 e-125
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 445 e-125
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 444 e-125
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 444 e-125
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 444 e-125
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 444 e-125
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 419 e-117
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 265 2e-71
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 263 9e-71
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 168 3e-42
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 118 4e-27
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 111 3e-25
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 83 2e-16
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 83 2e-16
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 39 0.004
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.55
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.9
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 28 5.1
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 446 bits (1098), Expect = e-126
Identities = 211/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 446 bits (1098), Expect = e-126
Identities = 211/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVL 154
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 445 bits (1097), Expect = e-125
Identities = 210/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 445 bits (1097), Expect = e-125
Identities = 210/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 51 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 110
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 111 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 170
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES G
Sbjct: 171 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 230
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 231 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 270
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 445 bits (1097), Expect = e-125
Identities = 210/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 81 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 140
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 141 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 200
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES G
Sbjct: 201 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 260
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 261 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 300
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 445 bits (1097), Expect = e-125
Identities = 210/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEALFQPSFLGMES G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAG 274
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 444 bits (1095), Expect = e-125
Identities = 209/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 444 bits (1095), Expect = e-125
Identities = 209/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 444 bits (1095), Expect = e-125
Identities = 209/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 444 bits (1095), Expect = e-125
Identities = 209/220 (95%), Positives = 218/220 (99%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG+VL
Sbjct: 95 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVL 154
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 214
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+GNERFRCPEA+FQPSFLGMES G
Sbjct: 215 EKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEAMFQPSFLGMESAG 274
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIADRM
Sbjct: 275 IHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIADRM 314
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 419 bits (1031), Expect = e-117
Identities = 195/220 (88%), Positives = 210/220 (95%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
LR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFN+PAMYV IQAVLSLYASGRTTGIVL
Sbjct: 94 LRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVL 153
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
D+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIK
Sbjct: 154 DTGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIK 213
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCYVA DFE E+A AA+S+SLEKSYELPDGQVITIGNERFRCPE LFQP+F+GME G
Sbjct: 214 EKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITIGNERFRCPEVLFQPAFIGMEGAG 273
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
IHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIADRM
Sbjct: 274 IHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIADRM 313
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 265 bits (650), Expect = 2e-71
Identities = 125/220 (56%), Positives = 160/220 (72%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
L++ PEEHPVLLT+APLNP NRE+ +I FETFN PA+Y+ +QAVLSLYA+GRTTG+VL
Sbjct: 98 LKIFPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVL 157
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++K
Sbjct: 158 DSGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMK 217
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
E CY+ALD T + S++ SY LPD I I N FR PE LF+P +G E G
Sbjct: 218 ENACYLALD-----PTKVENNSVKSSYALPDTTKIEISNSLFRAPEVLFKPDLIGTEWPG 272
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
+ V SIMKCDVD+R+ LY+N V+SGGTT++ G DR+
Sbjct: 273 MAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGDRL 312
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 263 bits (644), Expect = 9e-71
Identities = 119/220 (54%), Positives = 158/220 (71%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
L + P+E +LLTE PLNP +NREKM Q+MFE + ++YVA+QAVL+LYA G TG+V+
Sbjct: 98 LDIDPKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVV 157
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK 360
DSGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +K
Sbjct: 158 DSGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMK 217
Query: 361 EKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCG 540
EKLCY+A D EQE A +T L + Y LPDG+VI +G ERF PE LFQP + +E G
Sbjct: 218 EKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRLGGERFEAPEILFQPHLINVEKAG 277
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
+ E ++ I D+D R D Y + V+SGGTTMYPG+ R+
Sbjct: 278 LSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLPSRL 317
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 168 bits (409), Expect = 3e-42
Identities = 94/237 (39%), Positives = 134/237 (56%), Gaps = 17/237 (7%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT----- 165
LR PE+H LLTE PLN NRE +IMFE+FN P +Y+A+QAVL+L AS +
Sbjct: 108 LRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANE 167
Query: 166 ---TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 336
TG+V+DSGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++
Sbjct: 168 RSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQS 227
Query: 337 REIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDG-QVIT-------IGNERFRC 492
E+ + IKEK CYV D +E T K DG IT +G ERF
Sbjct: 228 YEVAKMIKEKFCYVCPDVMKEF--VKYDTDAAKWLRTYDGINSITKKPFNVDVGYERFLG 285
Query: 493 PEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
PE F P F E + I +T+ I +C +D+R+ LY N V+SGG+TM+ A ++
Sbjct: 286 PEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMFKDFARKL 342
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 118 bits (284), Expect = 4e-27
Identities = 71/226 (31%), Positives = 120/226 (53%), Gaps = 6/226 (2%)
Frame = +1
Query: 1 LRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVL 180
L+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V+
Sbjct: 267 LKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVVV 326
Query: 181 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG---YSFTTTAEREIVR 351
D G+ V+ VP+ +GY + AI + + + D L L+ Y+F + E+ I+R
Sbjct: 327 DIGERVN-IVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAHNKGLYAFQSPVEKLILR 385
Query: 352 DIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNERFRCPEALFQPSFL 522
E+ YV D+++E + T SL+ P Q I N RF C E LF+P
Sbjct: 386 FALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSRFLCTEGLFKPKKW 445
Query: 523 GMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA+++
Sbjct: 446 GLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKL 491
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 111 bits (268), Expect = 3e-25
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 35/251 (13%)
Frame = +1
Query: 13 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGD 192
P EHPVL +E+ N +A REK+T+IMFE F PA Y++ VLS +A GRT G+++DSG
Sbjct: 121 PSEHPVLFSESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGA 180
Query: 193 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT---AEREIVRD--- 354
+ VP+++GYA+ HA+++ + G +T+ L ++L ++ T +E V +
Sbjct: 181 TQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGKEEVNEGEA 240
Query: 355 ----IKEKLCYVALDFE--------QEMATA---AASTSLEKSY---------ELPDGQV 462
++ L V ++ ++MA TS++ Y P+G
Sbjct: 241 PKWTPRKNLPQVTKSYDAFMKKMLLEDMAATMLQLCDTSIDMDYVDKLPSTPYAFPNGYT 300
Query: 463 ITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLYANTVMSGG 627
G ER + PE LF +L E + + S D+DIR L++N ++GG
Sbjct: 301 KEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNVTVTGG 360
Query: 628 TTMYPGIADRM 660
++ G +R+
Sbjct: 361 NSLILGFTERL 371
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 82.6 bits (195), Expect = 2e-16
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Frame = +1
Query: 79 TQIMFETFNSPAMYVAIQAVLSLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAI 246
++I+F+ F ++ + L S + +V+DSG + G + ++
Sbjct: 111 SEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSV 170
Query: 247 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---A 417
+R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 171 IRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQ 228
Query: 418 STSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMESCG 540
+ K Y +PD G V I +G ERF PE LF PS + ++ CG
Sbjct: 229 ENTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCG 288
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
+ E V SI +C +R L N ++ GG++ +PG +R+
Sbjct: 289 VAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERL 328
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 82.6 bits (195), Expect = 2e-16
Identities = 58/220 (26%), Positives = 104/220 (47%), Gaps = 26/220 (11%)
Frame = +1
Query: 79 TQIMFETFNSPAMYVAIQAVLSLYASGRTTG----IVLDSGDGVSHTVPIYEGYALPHAI 246
++I+F+ F ++ + L S + +V+DSG + G + ++
Sbjct: 111 SEILFDYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSGFSWTTVASFVNGMLIQDSV 170
Query: 247 LRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA---A 417
+R+D+ G+ LT+ L ++ R + E ++ + KE LC+V+ +F++ M A
Sbjct: 171 IRIDVGGKALTNKLKDWVSYR--QLNVSEETYVINECKEDLCFVSQNFDESMKEARNRFQ 228
Query: 418 STSLEKSYELPD------GQV-------------ITIGNERFRCPEALFQPSFLGMESCG 540
+ K Y +PD G V I +G ERF PE LF PS + ++ CG
Sbjct: 229 GNTTMKRYIMPDFHSTFRGVVKDVKEPHDPQIPSIHLGVERFAIPEILFNPSDIDIDQCG 288
Query: 541 IHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
+ E V SI +C +R L N ++ GG++ +PG +R+
Sbjct: 289 VAEAVIESICQCPEALRPALAENIIVIGGSSCFPGFRERL 328
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 38.7 bits (86), Expect = 0.004
Identities = 48/226 (21%), Positives = 88/226 (38%), Gaps = 28/226 (12%)
Frame = +1
Query: 67 REKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 246
R +T+I+ E ++ V + + +V+D G VPI EG + +
Sbjct: 6 RNTITKIVVEKIRCKSLMFMPSHVCATFPFNTQNALVVDIGHSECIAVPIIEGVTMLNEF 65
Query: 247 LRL-DLAGRDLTDYLMKILTERGYSFTTTAEREIV-----RDIK-----EKLCYVALDFE 393
+ GR L + + + + G ER + +DI E L + +
Sbjct: 66 ESARSICGRQLERRVREQMEKYGQIAELNGERRAITENDWQDIDACKLIETLSLSLICLD 125
Query: 394 QEMATAAASTSLEKSYELPDGQVITIGNER--------FRCPEALFQPS---FLGME--- 531
+E A + E PD + T+ ER F P +F+ S F
Sbjct: 126 KERAENWTKWEASEEGEKPD--IETLCKERLFPNNGKIFVVPPVVFETSTEIFFNENLNP 183
Query: 532 ---SCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRM 660
+ + ++ + KC +D+RK L+ N +++GG + PG+ R+
Sbjct: 184 TSFDLSLPKLLHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRL 229
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 197 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 102
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.55
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -1
Query: 342 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 208
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +3
Query: 204 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 383
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 384 RLRAG 398
+ AG
Sbjct: 130 QTDAG 134
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = +1
Query: 46 PLNPKANREKMTQIMF-ETFNSPAMYVAIQA--VLSLYASGRTTGIVLDSGDGVSHTVPI 216
PL+ K+ K T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 235 PLDAKSKGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,769,803
Number of Sequences: 27780
Number of extensions: 254613
Number of successful extensions: 916
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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